Detailed information NTG0470479

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: H2789_RS01445
• Genome accession: NZ_CP059549
• Coordinates: 305495..306553 (+)
• Length: 352 a.a.
• NCBI ID: WP_347019402.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain NCIMB13260
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 300495..311553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H2789_RS01430 (H2789_01435)	-	301557..301889 (+)	333	WP_004639737.1	hypothetical protein	-
H2789_RS01435 (H2789_01440)	-	301892..302716 (+)	825	WP_347019400.1	putative RNA methyltransferase	-
H2789_RS01440 (H2789_01445)	ponA	302772..305333 (-)	2562	WP_347019401.1	penicillin-binding protein PBP1a	-
H2789_RS01445 (H2789_01450)	pilM	305495..306553 (+)	1059	WP_347019402.1	pilus assembly protein PilM	Machinery gene
H2789_RS01450 (H2789_01455)	pilN	306553..307194 (+)	642	WP_347019403.1	PilN domain-containing protein	Machinery gene
H2789_RS01455 (H2789_01460)	pilO	307191..307940 (+)	750	WP_045433421.1	type 4a pilus biogenesis protein PilO	Machinery gene
H2789_RS01460 (H2789_01465)	pilP	307951..308478 (+)	528	WP_045433419.1	pilus assembly protein PilP	Machinery gene
H2789_RS01465 (H2789_01470)	pilQ	308541..310694 (+)	2154	WP_347019404.1	type IV pilus secretin PilQ family protein	Machinery gene
H2789_RS01470 (H2789_01475)	aroK	310706..311275 (+)	570	WP_005038276.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39034.64 Da
• Isoelectric Point: 4.4217

>NTDB_id=470479 H2789_RS01445 WP_347019402.1 305495..306553(+) (pilM) [Acinetobacter calcoaceticus strain NCIMB13260]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTSNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQSGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=470479 H2789_RS01445 WP_347019402.1 305495..306553(+) (pilM) [Acinetobacter calcoaceticus strain NCIMB13260]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAGGCAGTTGCGGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCAGTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAATGATGATGAGCGAGAAGTTCAGAT
TCGATTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAAGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CTAATCCAAACCGCGTGAATGTACTTTTAGTTGCAACAAGAACAGAAAATGTTGAAACGCGAGTAGAAGTGCTGGAACTG
GTCGACTTAACTCCTAAGCTTGCTGATGTAGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTATTTGCTGATAGCTTGCC
AATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACTACATTATCGGTTATGCAAAGTGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTGACTTTGGAAATTCAAAGTCGCTATGGCCTGTCTTTAGAGGAA
GCGGGACGGGCTAAAAAAGAGCGCTCTTTACCAGATGATTATGATATTGAAGTCTTAGAGCCATTTCTTGATGCTGTCGT
GCAGCAAGCAGCTAGATCTCTACAATTTTTCTTCTCTTCATCACAATTCAATGAAATTGACCATATTTTACTCGCTGGTG
GGAATGCCAATATTCCTGGGCTTGCTAAATTGTTGCAGCAAAAACTTGGTTACCGTGTGACCATTGCCAATCCGTTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCGTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.591	100	0.966
comM	Acinetobacter nosocomialis M2	96.591	100	0.966
comM	Acinetobacter baylyi ADP1	81.818	100	0.818
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423