Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   H2R00_RS05730 Genome accession   NZ_CP059494
Coordinates   1170744..1170947 (-) Length   67 a.a.
NCBI ID   WP_154998779.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1165744..1175947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS05710 - 1166002..1168107 (-) 2106 WP_182070644.1 hydantoinase/oxoprolinase family protein -
  H2R00_RS05715 - 1168132..1169481 (-) 1350 WP_182070645.1 cytosine permease -
  H2R00_RS05720 - 1169514..1169900 (-) 387 WP_182070646.1 OsmC family protein -
  H2R00_RS05725 - 1169903..1170526 (-) 624 WP_182070647.1 TetR/AcrR family transcriptional regulator -
  H2R00_RS05730 rok 1170744..1170947 (-) 204 WP_154998779.1 hypothetical protein Regulator
  H2R00_RS05735 - 1171408..1171860 (+) 453 WP_154998777.1 DMT family transporter -
  H2R00_RS05740 - 1171882..1172367 (+) 486 WP_154998775.1 DMT family transporter -
  H2R00_RS05750 - 1172880..1173641 (+) 762 WP_182070648.1 N-acetylmuramoyl-L-alanine amidase -
  H2R00_RS05755 - 1173696..1174664 (-) 969 WP_154998771.1 multidrug resistance efflux transporter family protein -
  H2R00_RS05760 - 1174672..1175337 (-) 666 WP_182070649.1 GntR family transcriptional regulator -
  H2R00_RS05765 - 1175450..1175917 (-) 468 WP_182070650.1 Fur family transcriptional regulator -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 8072.24 Da        Isoelectric Point: 10.2672

>NTDB_id=470045 H2R00_RS05730 WP_154998779.1 1170744..1170947(-) (rok) [Bacillus haynesii strain P19]
MFNEREALRLRLEQLNNAEIQAIRELQNERKDIYSRLRELDRQKVSSSHHKKTLLQLVDETANLLKK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=470045 H2R00_RS05730 WP_154998779.1 1170744..1170947(-) (rok) [Bacillus haynesii strain P19]
GTGTTCAACGAAAGAGAGGCGCTCCGATTAAGACTGGAACAACTGAACAATGCCGAGATTCAAGCCATACGCGAACTCCA
AAATGAGCGGAAAGACATTTATTCCAGACTGCGGGAATTAGATCGTCAAAAAGTTTCATCATCACATCATAAAAAAACTT
TATTACAATTAGTCGATGAAACTGCAAATCTCTTGAAAAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

70.213

70.149

0.493