Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   H2R00_RS05485 Genome accession   NZ_CP059494
Coordinates   1124290..1124766 (-) Length   158 a.a.
NCBI ID   WP_182070621.1    Uniprot ID   -
Organism   Bacillus haynesii strain P19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119290..1129766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H2R00_RS05450 - 1119366..1119806 (-) 441 WP_154995171.1 hypothetical protein -
  H2R00_RS05455 - 1119990..1120346 (+) 357 WP_154995173.1 YxeA family protein -
  H2R00_RS05460 speG 1120385..1120927 (-) 543 WP_154995175.1 spermidine N1-acetyltransferase -
  H2R00_RS05465 - 1120956..1121273 (-) 318 WP_154995191.1 multidrug efflux SMR transporter -
  H2R00_RS05470 - 1121276..1121608 (-) 333 WP_076791210.1 multidrug efflux SMR transporter -
  H2R00_RS05475 - 1121689..1122273 (-) 585 WP_154995177.1 TetR family transcriptional regulator -
  H2R00_RS05480 - 1122983..1123603 (+) 621 WP_154995179.1 hypothetical protein -
  H2R00_RS05485 rok 1124290..1124766 (-) 477 WP_182070621.1 hypothetical protein Regulator
  H2R00_RS05490 - 1124903..1125502 (-) 600 WP_154998844.1 GNAT family N-acetyltransferase -
  H2R00_RS05495 - 1125536..1126015 (-) 480 WP_154998842.1 DUF4944 domain-containing protein -
  H2R00_RS05500 - 1126121..1126717 (-) 597 WP_182070622.1 class I SAM-dependent methyltransferase -
  H2R00_RS05505 - 1127102..1128079 (-) 978 WP_182070623.1 alpha/beta hydrolase family protein -
  H2R00_RS05510 - 1128834..1129262 (-) 429 WP_154998836.1 HIT domain-containing protein -
  H2R00_RS21150 - 1129532..1129740 (-) 209 Protein_1103 DUF3986 family protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18249.14 Da        Isoelectric Point: 10.3417

>NTDB_id=470044 H2R00_RS05485 WP_182070621.1 1124290..1124766(-) (rok) [Bacillus haynesii strain P19]
MFNEREALRLTLEQLGDAEIQVMRELRKERQDIYSKLRELDRESDPAINKKSSLIDLASAAAEELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAALNILIRHEEGLRGIKLKSEIEKETGFPIKNMTTFMKSLMKHRPEIKKPARGHYILQKPKSL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=470044 H2R00_RS05485 WP_182070621.1 1124290..1124766(-) (rok) [Bacillus haynesii strain P19]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGACACTTGAACAGCTAGGTGATGCGGAGATTCAGGTGATGCGGGAATTGCG
AAAAGAACGACAGGACATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGATCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGTGCTGCCGCAGAGGAATTAAAACAATCCCAACATGCCGCTGACAAACATCCGCCCATCAAGACT
CCATCTCATACTATTTTCCAATCAAAAACAACGATACAGCGTGAGGCTGCCTTAAACATTTTAATCCGCCATGAAGAAGG
CTTGAGGGGTATTAAGCTTAAAAGTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAATATGACGACATTTATGAAGA
GCTTGATGAAACATCGTCCAGAAATTAAAAAACCTGCCCGCGGCCATTATATTTTGCAAAAACCCAAAAGCCTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

44.444

100

0.506