Detailed information NTG0465927

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HU825_RS07355
• Genome accession: NZ_CP058908
• Coordinates: 1556494..1557558 (+)
• Length: 354 a.a.
• NCBI ID: WP_043297919.1
• Uniprot ID: -
• Organism: Pseudomonas phenolilytica strain RBPA9
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1551494..1562558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HU825_RS07340 (HU825_07330)	-	1551643..1552434 (+)	792	WP_234303218.1	thermonuclease family protein	-
HU825_RS07345 (HU825_07335)	-	1552582..1553850 (+)	1269	WP_008568316.1	malic enzyme-like NAD(P)-binding protein	-
HU825_RS07350 (HU825_07340)	-	1553916..1556315 (-)	2400	WP_077682697.1	penicillin-binding protein 1A	-
HU825_RS07355 (HU825_07345)	pilM	1556494..1557558 (+)	1065	WP_043297919.1	pilus assembly protein PilM	Machinery gene
HU825_RS07360 (HU825_07350)	pilN	1557558..1558130 (+)	573	WP_043297920.1	type 4a pilus biogenesis protein PilN	-
HU825_RS07365 (HU825_07355)	pilO	1558127..1558750 (+)	624	WP_043297921.1	type 4a pilus biogenesis protein PilO	-
HU825_RS07370 (HU825_07360)	pilP	1558747..1559274 (+)	528	WP_043297922.1	type 4a pilus biogenesis lipoprotein PilP	-
HU825_RS07375 (HU825_07365)	pilQ	1559330..1561474 (+)	2145	WP_234303219.1	type IV pilus secretin PilQ	Machinery gene
HU825_RS07380 (HU825_07370)	aroK	1561482..1562027 (+)	546	WP_043297924.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37911.41 Da
• Isoelectric Point: 4.6269

>NTDB_id=465927 HU825_RS07355 WP_043297919.1 1556494..1557558(+) (pilM) [Pseudomonas phenolilytica strain RBPA9]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIVELEGVGQALQRVVARAKVSVKQAAV
AVSGSAVITKSIEMESGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARSPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLAPMLAGAQGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASLPGLDRLIQQKIGTQTLVANP
FADMSLSNKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=465927 HU825_RS07355 WP_043297919.1 1556494..1557558(+) (pilM) [Pseudomonas phenolilytica strain RBPA9]
GTGCTAGGGCTCTTCACGAAGAAAGCGAACACGCTACTTGGGATCGATATTAGTTCGACATCCGTCAAGCTCCTCGAATT
GAGCCGCTCGGGTAATCGCTATCGGGTGGAGGCTTACGCCGTTGAGCCATTACCGCCGAATGCCGTCGTCGAGAAGAATA
TCGTCGAGCTCGAGGGTGTCGGTCAGGCGCTGCAGCGTGTTGTCGCCAGGGCCAAGGTAAGCGTCAAGCAGGCGGCGGTT
GCCGTGTCTGGCTCGGCGGTCATTACCAAGAGCATCGAGATGGAGTCCGGCCTCTCGGACGATGAGTTGGAAAATCAGCT
CAAGATCGAGGCGGATCAGTACATCCCTTACCCCCTTGAAGAGGTAGCCATCGACTTCGAGGTACAGGGTCCTGCCGCGC
GTTCGCCCGGACGTGTAGAAGTGCTGTTGGCAGCCTGTCGCAAAGAAAACGTCGAGATCCGCGAGGCCGCCCTTGCGCTG
GCGGGCCTAACTGCGAAGGTGGTGGATGTCGAGGCCTATGCGCTGGAGCGCTCCTACGGCCTGCTTGCTCCGATGTTGGC
AGGTGCGCAGGGCGAGCTGACAGTGGCTGTCGTTGATATCGGTGCCACCATGACAACTCTAAGCGTGTTGCACAACGGAC
GCACCATCTATACGCGCGAGCAGCTATTCGGCGGCCGTCAGCTGACCGAAGAGATTCAGCGGCGTTATGGTTTGTCCGTT
GAGGAAGCTGGTTTGGCCAAGAAACAGGGTGGTCTTCCAGATGACTACGACAGCGAGGTGTTGCAGCCGTTCAAGGAGGC
GGTGGTGCAACAGGTCTCGCGTTCGCTGCAGTTCTTTTTCGCCGCCGGCCAATTCCATGATGTGGATTACATTTTGCTGG
CCGGCGGTACGGCGTCGCTGCCAGGACTCGATCGTCTGATCCAGCAGAAGATCGGTACTCAGACTCTAGTCGCCAATCCC
TTTGCCGATATGTCGCTGAGTAACAAGGTCAACGCAGGAGCGCTGGCCAGTGATGCACCGGCGCTGATGATTGCGTGTGG
CTTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	47.74	100	0.477