Detailed information NTG0465150

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SSU16085_RS04720
• Genome accession: NZ_CP058740
• Coordinates: 1000018..1000959 (+)
• Length: 313 a.a.
• NCBI ID: WP_024381435.1
• Uniprot ID: A0A075SIN6
• Organism: Streptococcus suis strain 16085/3b
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 995018..1005959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU16085_RS04705 (SSU16085_00960)	-	995867..996904 (-)	1038	WP_192063032.1	3-deoxy-7-phosphoheptulonate synthase	-
SSU16085_RS04710 (SSU16085_00961)	-	997204..997797 (-)	594	WP_024394673.1	DUF1361 domain-containing protein	-
SSU16085_RS04715 (SSU16085_00962)	metG	997954..999957 (+)	2004	WP_044675531.1	methionine--tRNA ligase	-
SSU16085_RS04720 (SSU16085_00963)	coiA	1000018..1000959 (+)	942	WP_024381435.1	competence protein CoiA	Machinery gene
SSU16085_RS04725 (SSU16085_00964)	pepF	1001190..1002992 (+)	1803	WP_024381434.1	oligoendopeptidase F	Regulator
SSU16085_RS04730 (SSU16085_00965)	-	1002994..1003434 (+)	441	WP_024394669.1	hypothetical protein	-
SSU16085_RS04735 (SSU16085_00966)	-	1003450..1003998 (+)	549	WP_002938103.1	DUF6630 family protein	-
SSU16085_RS04740 (SSU16085_00967)	-	1004073..1004792 (+)	720	WP_043032894.1	O-methyltransferase	-
SSU16085_RS04745 (SSU16085_00968)	prsA	1004853..1005854 (+)	1002	WP_024394667.1	peptidylprolyl isomerase PrsA	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36249.85 Da
• Isoelectric Point: 8.0997

>NTDB_id=465150 SSU16085_RS04720 WP_024381435.1 1000018..1000959(+) (coiA) [Streptococcus suis strain 16085/3b]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGFQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTCPLDRALPRYIAQQLYYKSPNWL
ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=465150 SSU16085_RS04720 WP_024381435.1 1000018..1000959(+) (coiA) [Streptococcus suis strain 16085/3b]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCTGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGGCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTTTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGATGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGACATCTTGCGTCTGCCATTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGCTTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTATCCCCACATCCGTCT
ACCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCCTAGTTTATCAGGATTTTGACCAGTATTACGGCA
ATATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-221)

3D structure

• AlphaFold DB: A0A075SIN6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	52.564	99.681	0.524
coiA	Streptococcus pneumoniae TIGR4	50.641	99.681	0.505
coiA	Streptococcus pneumoniae Rx1	50.641	99.681	0.505
coiA	Streptococcus pneumoniae D39	50.641	99.681	0.505
coiA	Streptococcus pneumoniae R6	50.641	99.681	0.505
coiA	Lactococcus lactis subsp. cremoris KW2	41.875	100	0.428