Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   CQZ96_RS14555 Genome accession   NZ_CP058272
Coordinates   3111971..3113122 (-) Length   383 a.a.
NCBI ID   WP_034618195.1    Uniprot ID   A0A8X8GKX5
Organism   Acinetobacter sp. MYb10     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3106971..3118122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CQZ96_RS14535 (CQZ96_014565) - 3107903..3108547 (+) 645 WP_004823720.1 TetR/AcrR family transcriptional regulator -
  CQZ96_RS14540 (CQZ96_014570) - 3108690..3109583 (+) 894 WP_004823721.1 DMT family transporter -
  CQZ96_RS14545 (CQZ96_014575) - 3110204..3110773 (-) 570 WP_096735350.1 L-threonylcarbamoyladenylate synthase -
  CQZ96_RS14550 (CQZ96_014580) dprA 3110820..3111947 (-) 1128 WP_105714234.1 DNA-processing protein DprA Machinery gene
  CQZ96_RS14555 (CQZ96_014585) tsaP 3111971..3113122 (-) 1152 WP_034618195.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  CQZ96_RS14560 (CQZ96_014590) def 3113246..3113776 (+) 531 WP_004723400.1 peptide deformylase -
  CQZ96_RS14565 (CQZ96_014595) - 3113846..3114343 (+) 498 WP_411909884.1 DUF2946 family protein -
  CQZ96_RS14570 (CQZ96_014600) - 3114414..3116492 (+) 2079 WP_105714236.1 TonB-dependent copper receptor -
  CQZ96_RS14575 (CQZ96_014605) - 3116535..3116777 (+) 243 WP_004823727.1 hypothetical protein -
  CQZ96_RS14580 (CQZ96_014610) - 3116900..3118108 (-) 1209 WP_105714237.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41809.73 Da        Isoelectric Point: 9.2160

>NTDB_id=463363 CQZ96_RS14555 WP_034618195.1 3111971..3113122(-) (tsaP) [Acinetobacter sp. MYb10]
MKKVLTGITNFHAKGFKKQLLAVTLCLSAGFTYMEITHASPNTNPPALKSSAPNVYVVKRGDTLWDIAGKFLSKPWRWPE
IWASNKHVKNPHWIYPGDKLLLCTLDGRPLIGVDEGDGCDGIIRRHQGGTSLRPQIRVESLNNAISVIPLSDIQPWLEHS
IVVNPESLQNIPYTIGAADNRVITGAGQTVYARGNGLVVGQRYGIYREGKPYTFLNAEGKKFNAGMELTEVASATAAAGE
NDVTTLELTKSYNAEVRKGDYVLPSYDAELPSLFYPTTTNEVSNGGKVVRVQGSIGTAAQYSVVTIDRGSLQGAKPGQVF
SIYQQGETVRDPKTKESVKLPSQKIGTLMIFKSFDHLSYAYILESNLPIKMGAEIKPPAIADN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=463363 CQZ96_RS14555 WP_034618195.1 3111971..3113122(-) (tsaP) [Acinetobacter sp. MYb10]
ATGAAAAAGGTTTTAACTGGCATAACGAACTTTCATGCCAAGGGGTTCAAGAAACAATTACTTGCTGTAACACTATGTTT
AAGTGCAGGATTCACTTACATGGAAATCACACACGCAAGTCCAAATACCAATCCACCTGCACTGAAATCCAGTGCCCCCA
ATGTCTATGTGGTGAAACGTGGTGATACTTTATGGGATATTGCGGGGAAATTTTTAAGCAAGCCTTGGCGCTGGCCTGAA
ATCTGGGCAAGCAATAAGCATGTTAAAAATCCACATTGGATTTATCCAGGCGATAAATTATTGTTGTGTACTTTAGATGG
TCGCCCATTGATTGGTGTAGATGAAGGTGATGGTTGTGATGGAATTATCCGTCGTCATCAAGGTGGAACATCTTTACGCC
CTCAAATACGCGTTGAATCCTTAAATAATGCGATTTCAGTGATTCCATTATCAGATATTCAACCGTGGTTAGAACACAGT
ATTGTGGTCAATCCTGAATCTTTACAGAACATCCCTTATACCATCGGTGCTGCTGATAATCGTGTGATTACGGGTGCAGG
ACAAACCGTTTATGCGCGTGGAAATGGCTTAGTCGTGGGTCAACGTTATGGGATCTATCGTGAAGGCAAACCCTATACAT
TCCTCAATGCTGAAGGCAAAAAGTTTAATGCGGGCATGGAGTTAACTGAGGTTGCTTCTGCAACTGCGGCGGCTGGTGAA
AATGATGTCACCACCCTAGAGTTAACCAAAAGTTATAATGCTGAAGTGCGTAAGGGCGACTATGTCCTACCAAGCTATGA
TGCTGAATTGCCGAGTTTGTTCTATCCAACCACCACCAATGAAGTCAGCAATGGCGGTAAAGTGGTTCGTGTACAAGGTT
CAATTGGTACAGCAGCGCAATATAGTGTAGTCACCATTGACCGTGGTAGCTTACAAGGTGCTAAACCTGGGCAAGTCTTT
AGTATTTACCAACAAGGTGAAACAGTCCGTGACCCAAAAACTAAAGAGTCTGTGAAATTACCAAGTCAAAAAATTGGTAC
ACTGATGATCTTTAAGAGTTTTGATCACCTCAGCTATGCCTATATTTTGGAAAGTAATTTACCAATTAAAATGGGTGCTG
AAATTAAACCACCTGCAATTGCAGATAACTAA

Domains


Predicted by InterproScan.

(56-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

63.021

100

0.632