Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   HW271_RS05100 Genome accession   NZ_CP058258
Coordinates   1030585..1031541 (-) Length   318 a.a.
NCBI ID   WP_178895111.1    Uniprot ID   A0A7H8Z976
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1025585..1036541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS05085 (HW271_05085) prsA 1026986..1027975 (-) 990 WP_178895108.1 peptidylprolyl isomerase PrsA -
  HW271_RS05090 (HW271_05090) - 1028049..1028762 (-) 714 WP_178895109.1 O-methyltransferase -
  HW271_RS05095 (HW271_05095) pepF 1028764..1030566 (-) 1803 WP_178895110.1 oligoendopeptidase F Regulator
  HW271_RS05100 (HW271_05100) coiA 1030585..1031541 (-) 957 WP_178895111.1 competence protein CoiA Machinery gene
  HW271_RS05105 (HW271_05105) - 1031779..1032927 (-) 1149 WP_178895112.1 DUF1887 family protein -
  HW271_RS05110 (HW271_05110) tehB 1033117..1033977 (-) 861 WP_178895113.1 SAM-dependent methyltransferase TehB -
  HW271_RS05115 (HW271_05115) smpB 1033992..1034459 (-) 468 WP_178895114.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 38329.17 Da        Isoelectric Point: 9.4391

>NTDB_id=463224 HW271_RS05100 WP_178895111.1 1030585..1031541(-) (coiA) [Streptococcus sp. oral taxon 061 strain F0704]
MFLARDKKGHLINALENEVKKQAYYCPACGTSVRLKKGKNVRTHFAHESLKSCDFYHENEGPEHLENKVALFNWAKKDAE
VEMEHLIPELKQIADILINKRLALEVQCSPISCELLRERSNGYRSLGIQVLWLLGEKLWLKERLTKLQRDFLYFSNNMGF
YLWELDYKKRVLRLKYLLHQDLKGKLHYQVKEFPYGKGNLLEILRTPYQQQKLTTFSIEQDANICRYIQKQLYYQNPYWM
KQQAQAYLRGENLLNLKTQDWYPQVRPIEHVHFCQISQNLYDYYRNFQAYYELNPQNQQQKLYPPAFYQHYFSKNMVK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=463224 HW271_RS05100 WP_178895111.1 1030585..1031541(-) (coiA) [Streptococcus sp. oral taxon 061 strain F0704]
ATGTTTTTAGCTAGAGATAAAAAAGGTCATTTAATCAACGCGTTAGAGAATGAAGTAAAGAAACAAGCTTATTATTGTCC
AGCTTGCGGAACGAGTGTTCGCTTGAAAAAAGGAAAAAATGTAAGAACTCATTTTGCACATGAAAGTTTAAAAAGTTGTG
ATTTTTATCATGAGAACGAAGGACCAGAACATTTAGAGAATAAGGTGGCACTTTTTAATTGGGCTAAGAAAGATGCTGAA
GTAGAAATGGAACATCTGATTCCTGAACTTAAGCAAATCGCAGATATCCTCATCAATAAGCGATTAGCACTGGAAGTTCA
GTGTAGTCCTATTTCTTGTGAACTTTTACGGGAGAGAAGCAATGGTTATCGAAGTTTGGGAATTCAAGTTCTTTGGCTAT
TGGGAGAAAAGCTCTGGCTAAAAGAGCGACTAACTAAACTTCAAAGAGATTTTCTTTATTTTAGTAATAATATGGGATTT
TATCTTTGGGAGTTAGATTATAAAAAACGAGTTTTGAGACTCAAGTATCTACTCCATCAAGATTTGAAAGGAAAACTACA
TTACCAGGTCAAGGAATTTCCATATGGCAAAGGGAATCTTTTAGAAATATTACGAACCCCTTATCAGCAACAAAAACTAA
CCACTTTTTCCATTGAGCAAGACGCAAATATTTGTCGTTACATTCAAAAACAACTCTATTATCAAAATCCATATTGGATG
AAGCAACAAGCCCAAGCTTACTTGAGAGGAGAAAACCTATTAAATTTGAAGACTCAGGACTGGTATCCCCAAGTAAGGCC
GATAGAACATGTTCATTTTTGTCAGATAAGTCAAAATCTATATGATTATTACCGCAACTTTCAGGCTTATTATGAACTGA
ATCCACAAAATCAGCAACAAAAGCTCTATCCACCTGCCTTTTATCAGCATTATTTCTCGAAAAATATGGTAAAATAG

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-256)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8Z976

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

66.038

100

0.66
  coiA Streptococcus pneumoniae TIGR4

63.208

100

0.632
  coiA Streptococcus pneumoniae Rx1

63.208

100

0.632
  coiA Streptococcus pneumoniae D39

63.208

100

0.632
  coiA Streptococcus pneumoniae R6

63.208

100

0.632
  coiA Lactococcus lactis subsp. cremoris KW2

41.304

100

0.418