Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   HW271_RS05095 Genome accession   NZ_CP058258
Coordinates   1028764..1030566 (-) Length   600 a.a.
NCBI ID   WP_178895110.1    Uniprot ID   A0A7H8ZA86
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1023764..1035566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS05080 (HW271_05080) ftsW 1025562..1026773 (-) 1212 WP_178895107.1 cell division peptidoglycan polymerase FtsW -
  HW271_RS05085 (HW271_05085) prsA 1026986..1027975 (-) 990 WP_178895108.1 peptidylprolyl isomerase PrsA -
  HW271_RS05090 (HW271_05090) - 1028049..1028762 (-) 714 WP_178895109.1 O-methyltransferase -
  HW271_RS05095 (HW271_05095) pepF 1028764..1030566 (-) 1803 WP_178895110.1 oligoendopeptidase F Regulator
  HW271_RS05100 (HW271_05100) coiA 1030585..1031541 (-) 957 WP_178895111.1 competence protein CoiA Machinery gene
  HW271_RS05105 (HW271_05105) - 1031779..1032927 (-) 1149 WP_178895112.1 DUF1887 family protein -
  HW271_RS05110 (HW271_05110) tehB 1033117..1033977 (-) 861 WP_178895113.1 SAM-dependent methyltransferase TehB -
  HW271_RS05115 (HW271_05115) smpB 1033992..1034459 (-) 468 WP_178895114.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69912.79 Da        Isoelectric Point: 4.5289

>NTDB_id=463223 HW271_RS05095 WP_178895110.1 1028764..1030566(-) (pepF) [Streptococcus sp. oral taxon 061 strain F0704]
MVLQRNEINEKDTWDLSTIFETDQKWEEELALLTEDTKEAASLEGHLLDSAESLLNITERYLDLSRRLEKLYVYAHMKND
QDTRVAKYQEYYAKAMTLYSQLDQVFSFYEPEFMAITEEQYQNFLAEEPRLQPYKHFFDKLLQNKEHVLSQREEELLAGA
GEIFGAASETFAILDNADIAFPFVKDEDGNEVQLSHGVYMRLVESKNREVRRGAYEALYSTYEQYQHTYAKTLQTNVKVQ
NYRAKVRNYTSAREAALAANFVPESVYDNLVSAVRKHLPLLHRYLSLRSKILGIPDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGEDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLQEVQDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSEF
LNNLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQDDRDRYIDYLKAGKSDYPL
NIMRKAGVDMEKEDYLNDAFEVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=463223 HW271_RS05095 WP_178895110.1 1028764..1030566(-) (pepF) [Streptococcus sp. oral taxon 061 strain F0704]
ATGGTATTACAACGAAATGAAATCAATGAAAAAGATACATGGGATCTATCAACAATCTTTGAAACAGACCAAAAATGGGA
AGAAGAATTAGCCCTATTAACCGAGGACACAAAAGAAGCAGCTAGCCTTGAAGGGCATCTTTTGGATAGCGCAGAGAGCC
TATTAAATATTACAGAGCGTTATTTGGATTTGAGCCGTCGTCTTGAAAAACTCTATGTCTACGCTCATATGAAAAACGAC
CAGGATACACGAGTTGCTAAATATCAAGAATACTATGCAAAAGCAATGACTCTTTATAGTCAACTCGACCAGGTGTTCTC
TTTCTATGAGCCAGAATTTATGGCAATAACAGAAGAGCAGTATCAAAACTTTTTAGCAGAAGAACCAAGACTCCAGCCTT
ATAAACACTTCTTTGATAAACTCTTGCAAAATAAGGAACATGTCCTTTCACAACGTGAAGAAGAGTTGTTAGCAGGTGCT
GGTGAAATCTTTGGTGCTGCTAGTGAAACTTTCGCTATCTTAGATAATGCAGATATCGCCTTTCCATTTGTTAAAGATGA
AGATGGAAATGAAGTGCAGTTGTCACACGGTGTCTATATGCGCTTAGTAGAATCTAAGAACCGTGAAGTTCGTCGTGGTG
CATATGAAGCACTATACTCTACCTATGAGCAATACCAGCACACTTACGCTAAAACCTTGCAGACCAATGTAAAAGTACAA
AACTACCGTGCAAAAGTTCGAAACTACACGAGTGCGCGTGAAGCAGCTCTTGCAGCGAACTTTGTTCCAGAAAGTGTCTA
TGACAACTTAGTATCTGCTGTTCGTAAGCATTTGCCATTATTGCATCGTTATCTCTCACTTCGCTCAAAAATATTGGGTA
TTCCAGACCTTAAAATGTACGATGTCTATACACCTTTGTCTTCAGTAGAATACAGCTTTACTTATGAGGAAGCCTTGAAG
AAGGCAGAAGAAGCTTTAGCAGTTCTTGGCGAAGATTACTTGAGTCGTGTCAAACGCGCCTTTAGCGAACGTTGGATTGA
TGTGTATGAAAACCAAGGCAAGCGTTCAGGTGCATACTCTGGTGGTTCCTACGATACTAACGCTTTTATGCTTCTTAACT
GGCAAGATAACCTAGACAATCTCTTTACTCTTGTACATGAGACAGGTCATAGTATGCATTCAAGCTACACGCGTGAAACC
CAACCTTATGTATACGGAGATTACTCAATCTTCTTGGCAGAAATTGCTTCAACAACCAATGAAAATATCTTAACTGAAAA
ATTATTGCAAGAAGTTCAAGATGACGCAACACGCTTTGCTATTCTCAATAACTTCTTGGATGGTTTCCGTGGAACAGTGT
TCCGCCAAACTCAATTTGCTGAATTTGAACATGCTATTCACCAAGCCGATCAAAATGGTGAAGTCTTGACAAGCGAGTTC
TTAAACAATCTCTATGCTGACTTGAACCAAGAATATTATGGCTTGAGCAAGGAAGACAACCCTCAAATTCAGTATGAGTG
GGCTCGTATCCCTCATTTCTACTATAATTACTATGTATATCAATATTCAACAGGTTTTGCAGCAGCTTCGGCCTTGGCTG
AAAAGATTGTTCACGGTAGTCAAGATGATCGTGACCGTTATATTGATTACCTCAAGGCTGGGAAGTCAGACTATCCTCTA
AATATCATGCGAAAAGCTGGTGTCGATATGGAAAAAGAAGACTATCTTAATGATGCTTTTGAAGTCTTTGAACGCCGTTT
GGACGAGTTCGAAGCCCTTGTTGAAAAATTAGGATTAGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8ZA86

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.282

99.333

0.668