Detailed information NTG0463219

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: HW271_RS03975
• Genome accession: NZ_CP058258
• Coordinates: 803498..804355 (+)
• Length: 285 a.a.
• NCBI ID: WP_398588216.1
• Uniprot ID: -
• Organism: Streptococcus sp. oral taxon 061 strain F0704
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 798498..809355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HW271_RS03960 (HW271_03960)	-	800221..800970 (+)	750	WP_178894933.1	class A sortase	-
HW271_RS03965 (HW271_03965)	-	801258..802334 (+)	1077	WP_178894934.1	aspartate-semialdehyde dehydrogenase	-
HW271_RS03970 (HW271_03970)	dapA	802456..803391 (+)	936	WP_178894935.1	4-hydroxy-tetrahydrodipicolinate synthase	-
HW271_RS03975 (HW271_03975)	dprA/cilB/dalA	803498..804355 (+)	858	WP_398588216.1	DNA-processing protein DprA	Machinery gene
HW271_RS03980 (HW271_03980)	topA	804475..806562 (+)	2088	WP_178894937.1	type I DNA topoisomerase	-
HW271_RS03985 (HW271_03985)	-	806671..807030 (+)	360	WP_045614983.1	YbaN family protein	-
HW271_RS03990 (HW271_03990)	-	807123..807755 (+)	633	WP_178894938.1	copper homeostasis protein CutC	-
HW271_RS03995 (HW271_03995)	-	807799..808455 (+)	657	WP_178894939.1	MmcQ/YjbR family DNA-binding protein	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31846.62 Da
• Isoelectric Point: 5.4508

>NTDB_id=463219 HW271_RS03975 WP_398588216.1 803498..804355(+) (dprA/cilB/dalA) [Streptococcus sp. oral taxon 061 strain F0704]
MKIDNFEIYKLKQAGLSNQQVLKVLQYGEIYDQELSLETIAEASECRNPVVFMERYHKLTFESMERLKKDFEKFPSFSIL
DDVYPISLSEIYDAPVLLFYKGDLNLLKLPKIAVVGSRSCSQTGTKSVRKVIEELENELVVVSGLARGIDTAAHMSILQT
GGKTIAVIGTGLDVYYPRSNKRLQEYIGDNHLILSEYGPGEEPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERA
MEEGRDVFSIPGSILDGRSDGCHHLIQEGAKLATCGQDILAEFEF

Nucleotide

• Length: 858 bp

>NTDB_id=463219 HW271_RS03975 WP_398588216.1 803498..804355(+) (dprA/cilB/dalA) [Streptococcus sp. oral taxon 061 strain F0704]
ATTAAGATTGATAATTTCGAGATTTATAAGTTAAAGCAAGCAGGTTTAAGTAATCAGCAGGTTCTGAAAGTACTTCAATA
CGGAGAAATTTATGATCAGGAATTGAGTTTAGAGACAATTGCTGAAGCCTCAGAGTGTCGTAATCCAGTAGTTTTTATGG
AGCGATATCATAAACTGACTTTTGAAAGCATGGAACGATTAAAGAAAGATTTTGAAAAGTTCCCATCATTTTCGATTCTG
GATGATGTTTATCCCATTTCGCTTAGTGAAATTTACGATGCACCTGTATTGCTTTTTTATAAAGGAGATTTAAATCTCTT
AAAATTACCAAAGATAGCAGTTGTAGGGAGTCGCTCTTGTAGTCAAACCGGAACCAAATCAGTCCGGAAAGTCATCGAAG
AACTGGAGAATGAATTAGTTGTGGTGAGCGGACTTGCTAGAGGAATTGACACAGCAGCCCATATGTCAATTCTTCAAACT
GGTGGCAAAACGATTGCAGTGATTGGTACTGGTTTAGACGTCTATTATCCTCGTTCAAATAAACGTCTTCAAGAATACAT
TGGAGACAATCATTTAATACTAAGTGAGTACGGACCAGGGGAAGAACCCTTGAAATTTCATTTTCCTGCCAGAAATCGCA
TTATTGCAGGATTGTGTCGAGGAGTTATCGTTGCAGAAGCTAAAATGAGATCTGGTAGCTTAATCACTTGTGAGCGTGCT
ATGGAGGAAGGTAGAGATGTCTTTTCGATTCCAGGTTCCATTTTAGATGGACGCTCAGACGGCTGTCATCATTTGATCCA
AGAAGGAGCAAAACTAGCAACATGTGGGCAGGATATTCTCGCTGAGTTTGAGTTTTAG

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-60)

• DNA recombination-mediator protein A (DNA_processg_A) (78-274)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	78.596	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae D39	78.596	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae R6	78.596	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	78.596	100	0.786
dprA/cilB/dalA	Streptococcus mitis SK321	77.895	100	0.779
dprA	Streptococcus mutans UA159	61.131	99.298	0.607
dprA	Lactococcus lactis subsp. cremoris KW2	54.77	99.298	0.544