Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   JJN14_RS08460 Genome accession   NZ_CP067992
Coordinates   1706463..1708799 (-) Length   778 a.a.
NCBI ID   WP_201058415.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1701463..1713799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS08440 (JJN14_08440) - 1701816..1703183 (-) 1368 WP_049502063.1 hypothetical protein -
  JJN14_RS08445 (JJN14_08445) - 1703196..1704734 (-) 1539 WP_000030105.1 Hsp70 family protein -
  JJN14_RS08450 (JJN14_08450) - 1704744..1705271 (-) 528 WP_033686457.1 hypothetical protein -
  JJN14_RS08455 (JJN14_08455) - 1705483..1706412 (+) 930 WP_201058414.1 helix-turn-helix domain-containing protein -
  JJN14_RS08460 (JJN14_08460) mutS/mutS2 1706463..1708799 (-) 2337 WP_201058415.1 endonuclease MutS2 Machinery gene
  JJN14_RS08465 (JJN14_08465) - 1708903..1709451 (-) 549 WP_115904881.1 CvpA family protein -
  JJN14_RS08470 (JJN14_08470) zapA 1709448..1709750 (-) 303 WP_000002019.1 cell division protein ZapA -
  JJN14_RS08475 (JJN14_08475) rnhC 1709837..1710718 (+) 882 WP_201058416.1 ribonuclease HIII -
  JJN14_RS08480 (JJN14_08480) lepB 1710722..1711336 (+) 615 WP_049486944.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87575.49 Da        Isoelectric Point: 6.9856

>NTDB_id=458255 JJN14_RS08460 WP_201058415.1 1706463..1708799(-) (mutS/mutS2) [Streptococcus mitis strain S022-V7-A3]
MNKKILETLEFNKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEMKEMQALFVEQPHFTILATKEIAGVCKRLEM
GADLNIEEFLLLKRVLLASRELQSFYSNLENVSLEELALWFEKFHDFPQLQGNLQAFNDAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQMLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMLRILQEISERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVCHPLVKNAVANDVHFGQD
LTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILAEKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPG
RSNAFEIAKRLGLSEVIVGDASQQVDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVDMALSESDQILKNLHSKSQLKPHEIIEAKAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLTSQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEKQVKKKQVNVVKRTSGRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=458255 JJN14_RS08460 WP_201058415.1 1706463..1708799(-) (mutS/mutS2) [Streptococcus mitis strain S022-V7-A3]
ATGAATAAGAAAATATTAGAAACATTAGAGTTCAATAAGGTCAAGGCTTTGTTTGAACCTCATTTGTTGACCGAGCAGGG
CTTGGAGCAATTGAGACAGCTTGCTCCGACTGCCAAAGCAGATAAAATCAAACAGGCTTTTGCTGAGATGAAGGAAATGC
AGGCTCTCTTTGTCGAGCAACCGCATTTTACCATTCTCGCAACTAAGGAAATCGCAGGAGTCTGCAAGCGGTTGGAGATG
GGAGCGGACCTCAATATCGAGGAGTTCCTACTCTTGAAGCGCGTACTTCTTGCTAGCCGAGAACTGCAAAGTTTTTATTC
TAATCTGGAAAATGTCAGCTTGGAAGAATTAGCCCTATGGTTTGAGAAATTTCACGATTTTCCGCAATTACAAGGAAATC
TACAAGCCTTTAATGATGCAGGTTTCATTGAAAATTTTGCCAGTGAAGAATTGGCACGAATCCGTCGAAAAATTCATGAT
AGCGAGAGTCAGGTACGTGATGTCTTGCAAGATTTGCTCAAACAAAAAGCGCAGATGTTGACGGAAGGGATTGTTGCAAG
CAGAAATGGCCGTCAGGTTTTACCAGTCAAAAACACCTACCGCAACAAGATTGCAGGTGTTGTTCATGACATTTCTGCCA
GCGGAAACACCGTCTATATCGAACCCCGTGAGGTGGTCAAACTGAGCGAAGAAATCGCTAGTCTGCGAGCAGATGAGCGT
TATGAAATGCTTCGCATTCTCCAAGAAATTTCTGAGCGTGTCCGCCCACATGCTGCTGAGATTGCCAATGATGCTTGGAT
TATCGGTCATCTAGACTTGATTCGTGCCAAGGTCCGCTTTATCCAAGAGAGGCAAGCAGTTGTTCCTCAGCTGTCAGAAA
ATCAGGAGATTCAACTGCTCCATGTCTGCCATCCTTTGGTCAAAAATGCGGTTGCGAATGATGTCCATTTTGGTCAAGAT
TTAACAGCCATTGTCATCACAGGTCCAAATACAGGTGGGAAGACCATCATGCTCAAAACTCTGGGCTTGACGCAGGTTAT
GGCTCAGTCTGGTTTGCCGATTTTAGCAGAAAAGGGAAGTCGTGTGGGTATTTTTGAAGAAATCTTTGCCGATATTGGCG
ATGAGCAGTCTATTGAGCAGAGTTTGTCTACCTTCTCTAGCCACATGACCAATATCGTGGATATTCTTGGCAAGGTCAAC
CAACATTCCCTCTTACTCTTAGACGAGTTGGGTGCTGGTACAGACCCTCAAGAAGGAGCTGCTCTTGCCATGGCTATTCT
GGAGGACCTTCGCCTGCGTCAAGTCAAGACCATGGCGACCACCCACTATCCCGAACTCAAGGCCTATGGTATTGAGACAG
CCTTTGTGCAAAATGCCAGCATGGAGTTTGATACTGCCACTCTTCGCCCGACCTATCGCTTTATGCAGGGCGTGCCTGGT
CGAAGCAATGCCTTTGAAATTGCCAAACGTCTAGGCCTATCTGAAGTCATCGTAGGGGATGCCAGCCAGCAGGTCGATCA
GGACAATGATGTCAACCGGATTATTGAGCAACTGGAAGAGCAGACGCTTGAAAGTCGTAAACGCTTGGATAATATCCGTG
AGGTGGAGCAAGAGAATCTCAAGATGAATCGTGCTCTCAAAAAACTTTACAACGAGCTCAATCGTGAAAAGGAAACAGAG
CTTAACAAGGCGCGTGAACAGGCAGCTGAGATTGTGGACATGGCCCTAAGTGAAAGTGATCAGATTCTCAAAAATCTCCA
TAGCAAATCCCAACTCAAGCCCCATGAAATCATTGAAGCCAAAGCCAAGCTGAAAAAATTAGCTCCTGAAAAAGTGGACT
TGTCTAAAAACAAGGTCCTTCAAAAGGCCAAGAAAAAACGAGCTCCAAAGGTGGGAGATGATATCGTGGTTCTCAGTTAT
GGACAGCGTGGTACCTTGACCAGCCAACTTAAGGATGGCCGTTGGGAAGCCCAAGTCGGTTTAATCAAGATGACCTTGGA
AGAAAAAGAATTTGATCTTGTTCAAGCCCAGCAAGAAAAGCAAGTCAAGAAGAAACAAGTCAATGTTGTGAAACGAACTT
CTGGTCGTGGCCCACAAGCAAGACTGGACCTTCGAGGCAAACGTTATGAAGAGGCCATGAATGAGCTAGATGCCTTTATC
GACCAAGCTCTGCTCAACAATATGGCCCAAGTCGATATCATCCATGGTATCGGTACAGGTGTCATCCGTGAAGGAGTCAC
CAAATACCTACAAAGAAACAAACATGTCAAGAGTTTCGGCTATGCCCCGCAAAATGCTGGGGGCAGTGGTGCAACTATTG
TCACTTTTAAAGGATAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-506)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.329

100

0.41