Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HWQ15_RS16145 Genome accession   NZ_CP056118
Coordinates   3417797..3418423 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter sp. DSM 30060     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3412797..3423423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWQ15_RS16125 (HWQ15_16125) - 3413196..3414956 (-) 1761 WP_063149028.1 Lon protease family protein -
  HWQ15_RS16130 (HWQ15_16130) matP 3415143..3415595 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  HWQ15_RS16135 (HWQ15_16135) ompA 3415661..3416713 (-) 1053 WP_017694761.1 porin OmpA -
  HWQ15_RS16140 (HWQ15_16140) sulA 3417070..3417579 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  HWQ15_RS16145 (HWQ15_16145) sxy/tfoX 3417797..3418423 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  HWQ15_RS16150 (HWQ15_16150) yccS 3418380..3420542 (-) 2163 WP_023299744.1 YccS family putative transporter -
  HWQ15_RS16155 (HWQ15_16155) - 3420561..3421007 (-) 447 WP_023299745.1 YccF domain-containing protein -
  HWQ15_RS16160 (HWQ15_16160) helD 3421130..3423184 (+) 2055 WP_063149027.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=458180 HWQ15_RS16145 WP_023299743.1 3417797..3418423(+) (sxy/tfoX) [Enterobacter sp. DSM 30060]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=458180 HWQ15_RS16145 WP_023299743.1 3417797..3418423(+) (sxy/tfoX) [Enterobacter sp. DSM 30060]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572