Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HUF09_RS02170 Genome accession   NZ_CP054623
Coordinates   460156..460563 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain DL201330     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 455156..465563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUF09_RS02140 (HUF09_02140) - 455204..456208 (-) 1005 WP_198580797.1 aspartate carbamoyltransferase catalytic subunit -
  HUF09_RS02145 (HUF09_02145) pyrR 456232..456744 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HUF09_RS02150 (HUF09_02150) ruvX 456856..457290 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HUF09_RS02155 (HUF09_02155) - 457290..457859 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  HUF09_RS02160 (HUF09_02160) - 457908..458801 (-) 894 WP_015649761.1 energy transducer TonB -
  HUF09_RS02165 (HUF09_02165) gshB 458948..459901 (-) 954 WP_003100943.1 glutathione synthase -
  HUF09_RS02170 (HUF09_02170) pilG 460156..460563 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HUF09_RS02175 (HUF09_02175) pilH 460610..460975 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  HUF09_RS02180 (HUF09_02180) - 461026..461562 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  HUF09_RS02185 (HUF09_02185) pilJ 461647..463695 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  HUF09_RS02190 (HUF09_02190) pilK 463756..464631 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=453840 HUF09_RS02170 WP_003084583.1 460156..460563(+) (pilG) [Pseudomonas aeruginosa strain DL201330]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=453840 HUF09_RS02170 WP_003084583.1 460156..460563(+) (pilG) [Pseudomonas aeruginosa strain DL201330]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385