Detailed information NTG0045364

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BAXH7_RS21595
• Genome accession: NC_017191
• Coordinates: 3411632..3412321 (-)
• Length: 229 a.a.
• NCBI ID: WP_198315882.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens XH7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3406632..3417321

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS17330 (BAXH7_03662)	fliW	3406722..3407153 (-)	432	WP_007407475.1	flagellar assembly protein FliW	-
BAXH7_RS17335 (BAXH7_03663)	-	3407183..3407752 (-)	570	WP_014471091.1	DUF6470 family protein	-
BAXH7_RS17340 (BAXH7_03664)	flgL	3407844..3408761 (-)	918	WP_013353778.1	flagellar hook-associated protein FlgL	-
BAXH7_RS17345 (BAXH7_03665)	flgK	3408773..3410290 (-)	1518	WP_014471092.1	flagellar hook-associated protein FlgK	-
BAXH7_RS17350 (BAXH7_03666)	-	3410306..3410788 (-)	483	WP_013353780.1	flagellar protein FlgN	-
BAXH7_RS17355 (BAXH7_03667)	flgM	3410803..3411069 (-)	267	WP_013353781.1	flagellar biosynthesis anti-sigma factor FlgM	-
BAXH7_RS17360 (BAXH7_03668)	-	3411139..3411558 (-)	420	WP_014471093.1	TIGR03826 family flagellar region protein	-
BAXH7_RS21595 (BAXH7_03669)	comFC	3411632..3412321 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
BAXH7_RS17370 (BAXH7_03670)	-	3412327..3412611 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
BAXH7_RS17375 (BAXH7_03671)	comFA	3412670..3414055 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
BAXH7_RS17380 (BAXH7_03672)	-	3414162..3415010 (-)	849	WP_013353786.1	DegV family protein	-
BAXH7_RS17385 (BAXH7_03673)	degU	3415107..3415796 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAXH7_RS17390 (BAXH7_03674)	degS	3415873..3417036 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 25295.06 Da
• Isoelectric Point: 8.6865

>NTDB_id=45364 BAXH7_RS21595 WP_198315882.1 3411632..3412321(-) (comFC) [Bacillus amyloliquefaciens XH7]
MNCLLCDSPISRSLTWSSLFSLAPEQEVCSACSNQFEKIEGPVCSLCGRPQQSNKKCADCMARESKTEQRFLLRQNRSVF
LYNDAMKDSLARFKFRGDTKIIQTFERDFTAGFKAAYPANTHILVPIPLSPERLAERGFNQSELLASLLGMPVISPLIRL
NNEKQSKKSKTERLSAEKKFSAAENSAEGMNVILIDDIYTTGATLHQAAGALLTAGKALSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=45364 BAXH7_RS21595 WP_198315882.1 3411632..3412321(-) (comFC) [Bacillus amyloliquefaciens XH7]
CTGAATTGTTTATTGTGTGACTCACCAATTTCAAGATCACTGACTTGGAGTTCTCTATTTTCTCTGGCGCCGGAGCAAGA
GGTATGCAGCGCATGCAGCAATCAATTTGAAAAAATCGAAGGCCCCGTGTGCAGTTTATGCGGAAGGCCTCAGCAGTCAA
ACAAAAAATGCGCTGACTGCATGGCGCGGGAATCAAAAACGGAACAGCGCTTTTTGTTGCGGCAGAACCGTTCGGTTTTT
TTGTATAATGATGCAATGAAGGACTCATTGGCCCGGTTTAAATTCAGGGGTGATACGAAAATCATTCAAACATTTGAACG
TGATTTTACTGCCGGCTTTAAAGCGGCATATCCGGCAAATACACATATCCTCGTCCCTATTCCGCTGAGCCCCGAACGGC
TGGCGGAGCGCGGATTTAATCAATCCGAGCTGCTGGCCTCGCTGCTCGGAATGCCCGTCATTTCCCCCCTCATCCGACTG
AACAATGAAAAACAATCCAAAAAGAGCAAAACAGAAAGGCTCTCCGCAGAAAAAAAGTTTTCAGCTGCCGAAAACTCCGC
CGAAGGTATGAACGTCATTTTAATAGACGATATTTATACGACGGGCGCCACACTGCATCAAGCTGCCGGAGCTCTGCTGA
CAGCAGGCAAAGCGTTATCGGTCTCCTCTTTTACTTTAATCAGGAGCTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (171-227)

• Double zinc ribbon domain (DZR_2) (2-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	59.471	99.127	0.59
comFC/cflB	Streptococcus mitis NCTC 12261	36.245	100	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	35.931	100	0.362
comFC/cflB	Streptococcus pneumoniae D39	35.931	100	0.362
comFC/cflB	Streptococcus pneumoniae R6	35.931	100	0.362