Detailed information NTG0045354

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BAXH7_RS17390
• Genome accession: NC_017191
• Coordinates: 3415873..3417036 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus amyloliquefaciens XH7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3410873..3422036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS17360 (BAXH7_03668)	-	3411139..3411558 (-)	420	WP_014471093.1	TIGR03826 family flagellar region protein	-
BAXH7_RS21595 (BAXH7_03669)	comFC	3411632..3412321 (-)	690	WP_198315882.1	ComF family protein	Machinery gene
BAXH7_RS17370 (BAXH7_03670)	-	3412327..3412611 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
BAXH7_RS17375 (BAXH7_03671)	comFA	3412670..3414055 (-)	1386	WP_013353785.1	DEAD/DEAH box helicase	Machinery gene
BAXH7_RS17380 (BAXH7_03672)	-	3414162..3415010 (-)	849	WP_013353786.1	DegV family protein	-
BAXH7_RS17385 (BAXH7_03673)	degU	3415107..3415796 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BAXH7_RS17390 (BAXH7_03674)	degS	3415873..3417036 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
BAXH7_RS17395 (BAXH7_03675)	-	3417259..3417906 (+)	648	WP_013353788.1	YigZ family protein	-
BAXH7_RS17400 (BAXH7_03676)	-	3417911..3419137 (+)	1227	WP_014472672.1	LCP family protein	-
BAXH7_RS17405 (BAXH7_03677)	-	3419237..3420313 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
BAXH7_RS17410 (BAXH7_03678)	-	3420446..3421642 (-)	1197	WP_014471096.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=45354 BAXH7_RS17390 WP_013353787.1 3415873..3417036(-) (degS) [Bacillus amyloliquefaciens XH7]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=45354 BAXH7_RS17390 WP_013353787.1 3415873..3417036(-) (degS) [Bacillus amyloliquefaciens XH7]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCATGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCGCTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTGGTTCTTATTATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948