Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   A7A1_RS00370 Genome accession   NC_019896
Coordinates   62988..63782 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 57988..68782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS00350 (A7A1_0124) walR 58230..58937 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  A7A1_RS00355 (A7A1_0125) walK 58945..60780 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  A7A1_RS00360 (A7A1_0126) walH 60770..62137 (+) 1368 WP_015250810.1 WalRK two-component regulatory system regulator WalH -
  A7A1_RS00365 (A7A1_0127) walI 62124..62966 (+) 843 WP_015250811.1 WalRK two-component regulatory system regulator WalI -
  A7A1_RS00370 (A7A1_0128) vicX 62988..63782 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  A7A1_RS00375 (A7A1_0129) htrA 63864..65066 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  A7A1_RS21390 - 65087..65216 (+) 130 Protein_73 hypothetical protein -
  A7A1_RS00385 (A7A1_0130) - 65213..65713 (-) 501 WP_015250813.1 PepSY domain-containing protein -
  A7A1_RS00390 (A7A1_0131) - 65874..66773 (-) 900 WP_015250814.1 PepSY domain-containing protein -
  A7A1_RS00395 - 66985..67669 (+) 685 Protein_76 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=45352 A7A1_RS00370 WP_003226939.1 62988..63782(+) (vicX) [Bacillus subtilis subsp. subtilis str. BSP1]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=45352 A7A1_RS00370 WP_003226939.1 62988..63782(+) (vicX) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCAAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment