Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   I6H74_RS08520 Genome accession   NZ_CP066069
Coordinates   1751048..1751710 (-) Length   220 a.a.
NCBI ID   WP_003057999.1    Uniprot ID   A0ABU0A4Z4
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1746048..1756710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS08505 (I6H74_08500) sodA 1747002..1747607 (-) 606 WP_002983977.1 superoxide dismutase SodA -
  I6H74_RS08510 (I6H74_08505) holA 1747697..1748743 (-) 1047 WP_115256828.1 DNA polymerase III subunit delta -
  I6H74_RS08515 (I6H74_08510) comEC/celB 1748824..1751067 (-) 2244 WP_046176930.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  I6H74_RS08520 (I6H74_08515) comEA 1751048..1751710 (-) 663 WP_003057999.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6H74_RS08525 (I6H74_08520) - 1752107..1752847 (-) 741 WP_022554937.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  I6H74_RS08530 (I6H74_08525) - 1752965..1753741 (+) 777 WP_115257098.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  I6H74_RS08535 (I6H74_08530) - 1753731..1754009 (+) 279 WP_046176932.1 GIY-YIG nuclease family protein -
  I6H74_RS08540 (I6H74_08535) - 1754033..1756033 (-) 2001 WP_115256826.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24080.46 Da        Isoelectric Point: 5.8872

>NTDB_id=453581 I6H74_RS08520 WP_003057999.1 1751048..1751710(-) (comEA) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MIDDLLTKGTNSLKKVYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYSSEESNILVDLK
GAVQQEGVYKLRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSAGKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=453581 I6H74_RS08520 WP_003057999.1 1751048..1751710(-) (comEA) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAAAAAGGTTTATTCTCTGCCACGCTTGATTGGTGTTGTGCT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGAAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATTCTTCAGAAGAGAGTAATATTTTAGTGGATTTAAAA
GGAGCCGTACAACAGGAGGGAGTTTATAAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAGGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAGGCAAATTTAGAGGAGTTACAACGTATTTCGGGCATTGGTGTAAAAAGGGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGACAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Bacillus subtilis subsp. subtilis str. 168

38.389

95.909

0.368