Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC/cflB   Type   Machinery gene
Locus tag   FOC72_RS01595 Genome accession   NZ_CP054570
Coordinates   327457..328122 (+) Length   221 a.a.
NCBI ID   WP_002893482.1    Uniprot ID   A0A859EKY3
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 322457..333122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS01570 (FOC72_01570) - 322580..323980 (+) 1401 WP_002893492.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  FOC72_RS01575 (FOC72_01575) - 323980..324339 (+) 360 WP_002893490.1 S1 RNA-binding domain-containing protein -
  FOC72_RS01580 (FOC72_01580) cysK 324444..325373 (-) 930 WP_002893488.1 cysteine synthase A -
  FOC72_RS01585 (FOC72_01585) - 325474..326106 (-) 633 WP_002893485.1 YigZ family protein -
  FOC72_RS01590 (FOC72_01590) comFA/cflA 326162..327460 (+) 1299 WP_002893483.1 DEAD/DEAH box helicase Machinery gene
  FOC72_RS01595 (FOC72_01595) comFC/cflB 327457..328122 (+) 666 WP_002893482.1 ComF family protein Machinery gene
  FOC72_RS01600 (FOC72_01600) raiA 328204..328746 (+) 543 WP_002893481.1 ribosome-associated translation inhibitor RaiA -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25559.50 Da        Isoelectric Point: 8.2170

>NTDB_id=453485 FOC72_RS01595 WP_002893482.1 327457..328122(+) (comFC/cflB) [Streptococcus sanguinis strain FDAARGOS_770]
MTECLLCKEQIKEKGSFLRLFLLKEEGPSCCSTCYQNFERISEEHCPRCFRNGQSDLCADCQKWEKEGNQVQHQSLFTYN
EAMKEYFSQFKFQGDYVLRFVFAKAAKKAVKMFREHTIVPIPVSIEKFQVRGFNQVQGILDAANLSYRDILEKKDTLAQS
SKTREERLQTQQAFKIKNGVDLPDKILLVDDIYTTGKTLQLAKQILLEAGVKEILTFSIAR

Nucleotide


Download         Length: 666 bp        

>NTDB_id=453485 FOC72_RS01595 WP_002893482.1 327457..328122(+) (comFC/cflB) [Streptococcus sanguinis strain FDAARGOS_770]
ATGACAGAGTGTCTTTTATGTAAGGAGCAAATTAAGGAGAAAGGCAGTTTTTTACGGCTTTTTCTATTAAAAGAAGAAGG
ACCAAGCTGCTGCTCCACTTGTTATCAAAATTTTGAACGCATATCTGAAGAGCATTGCCCACGCTGTTTTCGAAACGGGC
AATCAGATTTATGTGCAGATTGCCAAAAATGGGAGAAAGAGGGGAATCAAGTCCAGCATCAGTCACTATTTACCTATAAT
GAAGCAATGAAGGAATATTTCAGTCAATTCAAGTTTCAGGGAGACTATGTATTGCGCTTTGTATTTGCAAAAGCAGCTAA
AAAAGCAGTCAAAATGTTTAGAGAGCATACCATTGTTCCGATTCCAGTCAGTATCGAAAAATTTCAAGTGAGAGGTTTTA
ATCAAGTTCAGGGGATTTTAGATGCTGCAAACTTGTCATACAGAGATATCTTAGAGAAAAAAGACACCCTAGCACAGTCG
AGCAAGACACGTGAGGAGCGTCTGCAGACGCAGCAGGCTTTTAAAATTAAGAATGGAGTTGATTTGCCGGATAAAATTTT
GCTGGTTGATGATATCTATACGACTGGAAAAACCTTGCAATTAGCCAAGCAAATCTTGCTGGAAGCAGGAGTGAAAGAAA
TTTTGACATTTTCAATCGCAAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EKY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC/cflB Streptococcus pneumoniae TIGR4

48.858

99.095

0.484
  comFC/cflB Streptococcus pneumoniae Rx1

48.858

99.095

0.484
  comFC/cflB Streptococcus pneumoniae D39

48.858

99.095

0.484
  comFC/cflB Streptococcus pneumoniae R6

48.858

99.095

0.484
  comFC/cflB Streptococcus mitis NCTC 12261

48.402

99.095

0.48
  comFC/cflB Streptococcus mitis SK321

47.489

99.095

0.471