Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   FOC72_RS01040 Genome accession   NZ_CP054570
Coordinates   212038..214008 (+) Length   656 a.a.
NCBI ID   WP_002893625.1    Uniprot ID   A0A859ELM8
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 207038..219008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS01025 (FOC72_01025) - 207714..208283 (+) 570 WP_002893629.1 hypothetical protein -
  FOC72_RS01030 (FOC72_01030) pbp3 208347..209615 (-) 1269 WP_002893628.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FOC72_RS01035 (FOC72_01035) amiA 209909..211864 (+) 1956 WP_032913972.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS01040 (FOC72_01040) amiA3 212038..214008 (+) 1971 WP_002893625.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS01045 (FOC72_01045) - 214240..216215 (+) 1976 Protein_208 peptide ABC transporter substrate-binding protein -
  FOC72_RS01050 (FOC72_01050) amiC 216280..217776 (+) 1497 WP_002893622.1 ABC transporter permease Regulator
  FOC72_RS01055 (FOC72_01055) amiD 217776..218702 (+) 927 WP_002893621.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 656 a.a.        Molecular weight: 72572.07 Da        Isoelectric Point: 4.4954

>NTDB_id=453475 FOC72_RS01040 WP_002893625.1 212038..214008(+) (amiA3) [Streptococcus sanguinis strain FDAARGOS_770]
MKTSKLAAAAGLVILSAGILAACSFGGSNSSGKNYSYVYTADPDTLDYTVSNKRATNEIMANVVDGLLESDKYGNLVPSL
AEDWTVSKDGLTYTYKLREGVKWYTSDGEEYADVTAKDFVTSLKHAADSKSDGLYIVQKSIKGLDDYVNGKITDFSQVGV
KAVDDSTVQYTLNQPESFWNSKTTMGILFPINEEFLKSKGDKFAQGTDPTSVLYNGPFILKSITSKSQISLEKNPNYWDK
EKVKIDTVKFSYYDGQDTESLVRGFSDGNYTIARLFPNSSNFASVKKQYGDNIVYTPQGSGTFVVTTNIDRQSYEHTSKT
TDAQKSSTKKALLNKDFRQALLFAFDRTAYSAQTNGEEAADKQLRNTFVPPTFVQANGKEFGSIVEENLASYGDEWKGVK
LDDAQDGLYNPEKAKAEFAKAKEALQSEGVEFPIHLDIPVSSADTNGVKSVQSLKQSIEANLGSDNVVIDIQQMTDDELN
NITYFATSASQEDWDLNNNLGWSPDYNDPSSYLEITGSKTGENVDSYFGFDPGTDNAAAKEAGFEEYDKLLEDAASENED
INKRYEKYAAAQAWLTDSALLMPAWSSGATPSVRKVVPFSGPFAWTGNKGEYSFKYVEIQDKPITTKDYEKAREKWAKEK
EESNKKAQEELAEHIK

Nucleotide


Download         Length: 1971 bp        

>NTDB_id=453475 FOC72_RS01040 WP_002893625.1 212038..214008(+) (amiA3) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAAACATCTAAGTTAGCTGCAGCTGCTGGGCTTGTCATTCTCTCTGCAGGAATTCTGGCTGCCTGTTCGTTTGGTGG
CTCCAATTCATCTGGGAAAAACTATAGCTATGTTTATACGGCAGATCCAGATACGCTGGATTACACTGTGTCCAATAAGC
GGGCAACCAATGAGATTATGGCTAATGTAGTGGATGGTTTGCTGGAAAGCGATAAGTATGGTAACTTAGTGCCTTCTCTA
GCAGAAGATTGGACCGTTTCAAAAGATGGTCTGACCTATACTTATAAGCTTCGTGAGGGAGTGAAATGGTATACTTCTGA
TGGTGAAGAGTATGCAGATGTGACTGCTAAGGACTTTGTGACCAGTCTGAAGCATGCTGCTGACAGCAAGTCTGATGGTC
TCTATATCGTTCAAAAATCCATTAAAGGCTTGGACGACTATGTTAATGGTAAAATAACTGACTTCTCCCAAGTTGGTGTT
AAGGCGGTGGATGATTCTACTGTTCAGTATACTTTGAATCAGCCAGAAAGTTTCTGGAATTCTAAGACAACCATGGGGAT
TCTTTTCCCGATAAATGAAGAATTTCTGAAATCAAAAGGTGACAAGTTTGCTCAGGGGACAGATCCAACTAGTGTCCTCT
ATAACGGTCCGTTTATCTTGAAATCCATCACTTCGAAATCTCAAATTAGTTTAGAGAAGAATCCAAACTATTGGGATAAG
GAAAAGGTGAAAATTGATACTGTCAAATTCTCTTACTACGATGGGCAAGATACAGAATCGCTGGTGCGTGGCTTCTCTGA
CGGCAACTACACCATTGCTCGTCTTTTCCCAAATAGCTCCAACTTTGCCAGTGTGAAGAAACAGTATGGCGATAATATCG
TCTACACTCCTCAAGGTTCAGGAACCTTCGTTGTCACAACTAATATCGACCGTCAGTCTTACGAGCATACTTCTAAGACA
ACGGATGCACAGAAATCGTCCACTAAGAAAGCACTGCTCAATAAAGATTTCCGTCAGGCTCTGCTTTTTGCCTTTGACCG
TACTGCTTATTCTGCCCAAACCAATGGCGAAGAGGCAGCAGACAAGCAACTTCGTAATACCTTTGTTCCGCCAACCTTTG
TTCAAGCTAATGGTAAAGAGTTCGGCAGCATTGTAGAAGAAAATCTGGCTAGCTATGGTGATGAGTGGAAGGGAGTCAAA
TTAGACGACGCTCAGGATGGTCTTTATAACCCAGAAAAAGCTAAGGCAGAATTTGCCAAAGCCAAAGAAGCGCTGCAGTC
AGAAGGAGTGGAATTCCCAATTCATCTGGACATTCCGGTCAGCTCAGCAGATACCAATGGCGTTAAGAGTGTTCAGTCAT
TGAAGCAGTCTATCGAAGCTAATCTTGGCTCTGACAATGTGGTGATTGATATTCAGCAAATGACAGATGATGAGTTGAAT
AACATCACCTATTTTGCGACTTCTGCATCTCAAGAAGACTGGGATTTGAATAATAACCTCGGTTGGAGTCCAGATTATAA
CGATCCTTCTTCTTATCTGGAAATTACTGGCTCTAAGACTGGTGAGAATGTTGACAGCTACTTTGGATTTGACCCTGGAA
CGGATAATGCAGCAGCTAAAGAGGCTGGCTTTGAAGAGTATGATAAACTCTTGGAAGACGCTGCTTCAGAAAACGAGGAT
ATTAACAAACGTTACGAAAAATATGCAGCAGCTCAGGCTTGGCTGACAGACAGTGCCCTGTTAATGCCGGCATGGTCATC
TGGTGCAACACCAAGTGTCCGTAAGGTTGTTCCATTCTCAGGACCATTTGCTTGGACTGGAAACAAGGGCGAATACAGCT
TTAAATATGTTGAAATCCAAGATAAACCAATAACGACTAAAGATTATGAAAAAGCGCGTGAAAAATGGGCAAAAGAAAAG
GAAGAATCCAATAAAAAAGCTCAAGAAGAACTCGCGGAACATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859ELM8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

59.484

100

0.598
  amiA3 Streptococcus thermophilus LMG 18311

58.725

100

0.59
  amiA Streptococcus salivarius strain HSISS4

58.511

100

0.587