Detailed information NTG0453474

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: I6H78_RS06445
• Genome accession: NZ_CP066059
• Coordinates: 1318044..1319042 (+)
• Length: 332 a.a.
• NCBI ID: WP_332836290.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_1021
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1313044..1324042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H78_RS06425 (I6H78_06425)	-	1313279..1313617 (+)	339	WP_198459153.1	PTS lactose/cellobiose transporter subunit IIA	-
I6H78_RS06430 (I6H78_06430)	-	1313610..1314962 (+)	1353	WP_198459154.1	PTS sugar transporter subunit IIC	-
I6H78_RS06435 (I6H78_06435)	-	1314964..1316751 (+)	1788	WP_198459155.1	glycoside hydrolase family 35 protein	-
I6H78_RS06440 (I6H78_06440)	-	1316757..1317686 (+)	930	WP_198459156.1	aldo/keto reductase	-
I6H78_RS06445 (I6H78_06445)	ruvB	1318044..1319042 (+)	999	WP_332836290.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
I6H78_RS06450 (I6H78_06450)	-	1319023..1319607 (+)	585	WP_198459157.1	nucleotidyltransferase family protein	-
I6H78_RS06455 (I6H78_06455)	-	1319814..1320572 (+)	759	WP_198459158.1	isoprenyl transferase	-
I6H78_RS06460 (I6H78_06460)	-	1320581..1321384 (+)	804	WP_198459159.1	phosphatidate cytidylyltransferase	-
I6H78_RS06465 (I6H78_06465)	eeP	1321400..1322656 (+)	1257	WP_198459160.1	RIP metalloprotease RseP	Regulator

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37249.69 Da
• Isoelectric Point: 4.4987

>NTDB_id=453474 I6H78_RS06445 WP_332836290.1 1318044..1319042(+) (ruvB) [Streptococcus oralis strain FDAARGOS_1021]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEVVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVID
DVITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
AYEHLGYEYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=453474 I6H78_RS06445 WP_332836290.1 1318044..1319042(+) (ruvB) [Streptococcus oralis strain FDAARGOS_1021]
ATGAGTAGAATTTTAGATAATGAAATCATGGGTGATGAGGAGTTGGTAGAACGTACCCTCCGTCCCCAATATTTACGTGA
ATATATCGGTCAGGACAAGGTCAAGGATCAGCTACAAATATTTATCGAAGCCGCAAAAATGCGTGATGAGGCGCTGGATC
ATGTTCTTTTGTTTGGTCCTCCAGGTCTCGGGAAAACGACCATGGCCTTTGTCATTGCCAATGAATTGGGAGTCAATCTC
AAGCAGACGTCTGGTCCCGTTATCGAAAAAGCAGGTGATTTGGTAGCAATTTTGAATGACTTGGAGCCAGGAGATGTTCT
TTTTATTGACGAGATTCATCGCTTGCCCATGGCTGTTGAGGAAGTTTTATATAGTGCCATGGAAGATTTTTACATCGATA
TTATGATCGGTGCTGGTGAAACTAGTCGCAGTGTTCATCTGGACTTGCCACCTTTTACCTTGATTGGTGCGACGACCCGT
GCGGGTATGCTCTCAAATCCTCTGCGAGCACGTTTCGGGATCACAGGCCATATGGAATACTATGCCCACGCTGACTTGAC
AGAGGTTGTTGAGCGGACGGCAGATATCTTTGAGATGGAAATCACTCATGAAGCTGCATCTGAGTTAGCTTTACGTAGTC
GAGGAACTCCTCGTATTGCCAATCGTCTCCTCAAGCGCGTGCGCGACTTTGCCCAGATTATGGGGAATGGGGTTATCGAT
GATGTGATTACCGATAAGGCTTTGACCATGCTGGATGTAGACCGTGAAGGTTTGGACTATGTAGACCAAAAAATCCTTCG
CACCATGATTGAGATGTACGGTGGTGGTCCTGTCGGTTTAGGAACTCTTTCTGTTAATATTGCCGAGGAGCGTGAGACAG
TCGAAGATATGTACGAACCTTACCTCATCCAAAAAGGTTTTATCATGCGGACAAGGTCTGGACGGGTGGCGACTGCTAAG
GCATATGAACATTTAGGTTATGAATACAGTGAAAAATGA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	97.892	100	0.979
ruvB	Streptococcus pneumoniae R6	97.59	100	0.976
ruvB	Streptococcus pneumoniae D39	97.59	100	0.976
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.429	98.193	0.593
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	47.892	100	0.479