Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   FOC72_RS01035 Genome accession   NZ_CP054570
Coordinates   209909..211864 (+) Length   651 a.a.
NCBI ID   WP_032913972.1    Uniprot ID   A0A859EKL4
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 204909..216864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS01015 (FOC72_01015) sufU 205780..206217 (+) 438 WP_002893632.1 Fe-S cluster assembly sulfur transfer protein SufU -
  FOC72_RS01020 (FOC72_01020) sufB 206235..207647 (+) 1413 WP_002893631.1 Fe-S cluster assembly protein SufB -
  FOC72_RS01025 (FOC72_01025) - 207714..208283 (+) 570 WP_002893629.1 hypothetical protein -
  FOC72_RS01030 (FOC72_01030) pbp3 208347..209615 (-) 1269 WP_002893628.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  FOC72_RS01035 (FOC72_01035) amiA 209909..211864 (+) 1956 WP_032913972.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS01040 (FOC72_01040) amiA3 212038..214008 (+) 1971 WP_002893625.1 peptide ABC transporter substrate-binding protein Regulator
  FOC72_RS01045 (FOC72_01045) - 214240..216215 (+) 1976 Protein_208 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 651 a.a.        Molecular weight: 72647.63 Da        Isoelectric Point: 4.6829

>NTDB_id=453474 FOC72_RS01035 WP_032913972.1 209909..211864(+) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
MKKSKWLAITGLTVVSTLILAACGSSSASNTYSYVYIADPDTLDYVNSNRGTTSDVASNLVDGLLENDKYGNLVPSIAED
WTVSKDGLTYTYKLRKDAKWYTSDGEEYSEVKAQDFVTGLKHAADEKSEALPIVQSSIKGLDAYVKGESNDFSTVGVKAV
DDHTVEYTLNQPESYWNSKTTMGILFPINKEFLESKGKDFGTVKPSSILYNGPYILKAFTSKSVIEYAKNQNYWDKDNVK
VENIKLTYYDGSDQESLIRNFSDGAYSQARLYPTSSNYASVEKQYKDNIIYTPQNSTSYFFSFNLNRKAYNHSSKTTDAQ
KTSTTAAIQNKDFRQAINFAFDRTSFGAQMNGKDGATKLIRSLLVPPSFVQVDGKDFSDVVESKLPTYGDEWSGVKLTDA
QDTIYNADKAKAEFAKAKEALQAEGVEFPIHIDVPVDQTDKVLVQRTNSFKQSVEAALGQENVVIDVQQMSTDDYDNSAY
FAETAAQKDYDLNMSGWSADYQDPSTYLNIFNPETGDILDNIGLEKGKNQDIVNKVGLNEYKELLDEADKEKQDTDARYT
KYAAAQAWLTDSSIVIPSVSAGGSPVVQKVVPFTKSYSYVGIKGDTYVFKNMELKNDIVTVKDYEAALKKWEKEKEASNK
KAQEELEKHIK

Nucleotide


Download         Length: 1956 bp        

>NTDB_id=453474 FOC72_RS01035 WP_032913972.1 209909..211864(+) (amiA) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAAAAATCTAAATGGTTGGCCATTACTGGACTGACAGTCGTGTCAACACTGATTTTAGCCGCTTGTGGAAGCTCTAG
CGCCAGCAATACTTACTCTTATGTTTATATTGCTGACCCTGATACCTTGGACTATGTAAACTCCAATCGGGGAACGACTT
CTGATGTGGCTTCAAATCTGGTCGATGGACTTTTGGAAAATGACAAGTATGGCAATCTGGTTCCATCTATTGCGGAAGAC
TGGACTGTTTCAAAGGACGGTCTGACCTATACCTATAAGCTTCGCAAAGATGCTAAATGGTATACATCAGACGGTGAGGA
ATACTCAGAGGTTAAAGCTCAAGACTTTGTCACTGGTTTGAAGCATGCGGCAGATGAAAAATCAGAAGCTCTTCCAATCG
TCCAAAGCTCTATCAAAGGCTTGGATGCCTATGTCAAGGGTGAGTCAAATGACTTTTCAACGGTTGGCGTCAAGGCTGTC
GATGACCATACTGTCGAGTACACTCTTAACCAGCCAGAAAGTTATTGGAATTCCAAGACGACTATGGGGATTCTCTTTCC
GATTAACAAAGAATTCTTGGAATCAAAAGGAAAAGATTTTGGTACTGTAAAACCTTCTTCCATTCTTTATAATGGACCTT
ATATTCTGAAGGCTTTCACTTCTAAGTCTGTCATTGAATATGCTAAAAACCAGAACTACTGGGATAAGGACAATGTCAAG
GTTGAAAATATAAAACTGACTTACTATGATGGTTCAGACCAGGAATCCTTGATTCGCAACTTCTCAGACGGTGCCTATTC
TCAAGCGCGGCTTTATCCGACAAGTTCTAACTACGCTTCTGTAGAAAAGCAATACAAAGACAATATTATCTACACACCAC
AGAACTCAACCAGCTATTTCTTTAGCTTCAATCTGAATCGTAAGGCTTATAATCATTCGTCTAAGACCACAGATGCTCAG
AAGACATCGACTACAGCGGCTATTCAAAACAAGGATTTCCGTCAGGCGATTAACTTTGCCTTTGACCGGACATCTTTTGG
AGCTCAGATGAATGGTAAAGATGGAGCGACTAAACTTATCCGTAGCTTGCTTGTTCCTCCTAGCTTCGTGCAGGTTGATG
GCAAAGACTTTTCAGATGTTGTAGAGAGCAAACTTCCTACATACGGCGATGAGTGGAGCGGTGTCAAGTTGACAGATGCC
CAAGATACCATCTACAATGCTGACAAGGCCAAGGCAGAGTTTGCTAAGGCTAAGGAAGCCTTGCAAGCAGAAGGCGTTGA
ATTCCCTATCCATATTGATGTTCCTGTGGATCAGACTGACAAAGTCTTAGTACAGCGGACCAACTCTTTCAAACAGTCTG
TTGAAGCAGCGCTTGGTCAAGAAAATGTCGTTATTGATGTTCAGCAAATGTCCACAGATGACTACGATAATTCAGCCTAC
TTTGCAGAAACAGCAGCTCAGAAAGACTACGACCTCAACATGTCTGGCTGGTCAGCAGACTACCAAGATCCATCAACTTA
TCTGAATATTTTCAACCCAGAAACTGGTGATATTCTGGATAATATAGGATTAGAAAAAGGGAAAAATCAAGATATCGTCA
ATAAAGTCGGCTTGAACGAATACAAAGAGTTATTGGATGAGGCGGATAAGGAAAAACAAGATACCGACGCTCGTTATACT
AAATACGCAGCAGCTCAAGCTTGGCTGACAGATAGCTCCATTGTTATTCCTAGTGTTTCTGCGGGTGGTTCACCAGTCGT
TCAGAAGGTTGTTCCATTTACCAAGTCTTACTCTTATGTCGGAATCAAAGGGGATACTTATGTCTTTAAGAACATGGAGC
TCAAAAATGATATTGTGACAGTTAAAGACTACGAAGCAGCTCTTAAGAAATGGGAAAAAGAAAAGGAAGCATCCAATAAA
AAAGCCCAAGAAGAGCTAGAAAAACATATCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(73-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EKL4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

56.86

100

0.573
  amiA3 Streptococcus thermophilus LMD-9

55.319

100

0.559
  amiA3 Streptococcus thermophilus LMG 18311

55.015

100

0.556