Detailed information    

insolico Bioinformatically predicted

Overview


Name   uvrA   Type   Machinery gene
Locus tag   I6H78_RS06090 Genome accession   NZ_CP066059
Coordinates   1259968..1262799 (+) Length   943 a.a.
NCBI ID   WP_198459126.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1254968..1267799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS06060 (I6H78_06060) - 1255510..1256076 (+) 567 WP_198459123.1 DNA-3-methyladenine glycosylase I -
  I6H78_RS06065 (I6H78_06065) - 1256156..1256419 (-) 264 WP_000166112.1 SemiSWEET family transporter -
  I6H78_RS06070 (I6H78_06070) - 1256525..1257559 (-) 1035 WP_198460234.1 S66 peptidase family protein -
  I6H78_RS06075 (I6H78_06075) - 1257834..1258181 (-) 348 WP_198459124.1 hypothetical protein -
  I6H78_RS06080 (I6H78_06080) - 1258197..1258874 (-) 678 WP_198459125.1 DUF1129 domain-containing protein -
  I6H78_RS06085 (I6H78_06085) - 1258886..1259830 (-) 945 Protein_1179 magnesium transporter CorA family protein -
  I6H78_RS06090 (I6H78_06090) uvrA 1259968..1262799 (+) 2832 WP_198459126.1 excinuclease ABC subunit UvrA Machinery gene
  I6H78_RS06095 (I6H78_06095) - 1262792..1263853 (+) 1062 WP_198459127.1 M24 family metallopeptidase -
  I6H78_RS06100 (I6H78_06100) mgtA 1264255..1266915 (+) 2661 WP_198459128.1 magnesium-translocating P-type ATPase -
  I6H78_RS06105 (I6H78_06105) spx 1267050..1267448 (+) 399 WP_000591165.1 transcriptional regulator Spx -

Sequence


Protein


Download         Length: 943 a.a.        Molecular weight: 104037.91 Da        Isoelectric Point: 6.1579

>NTDB_id=453473 I6H78_RS06090 WP_198459126.1 1259968..1262799(+) (uvrA) [Streptococcus oralis strain FDAARGOS_1021]
MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMEKPDVDAIDGL
SPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPYCINGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKK
GQHKSIIEKVQKDGYVRVRVDGEVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD
SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKTLRDGALAPWNPISSNYYPNML
EQAMTAFGVDMDKPFEDLSEEDKNLILYGSDGKEFHFHYENEFGGVRDIDIPFEGVVNNIKRRYHETNSDYTRTQMRLYM
NELTCGTCHGYRLNDQALSVRVGGEQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADYLI
DVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRAIPVPAERRSGNGRFIEVTGARENNLQNVTVRFPLGKFIAVT
GVSGSGKSTLINSILKKAIAQKLNRNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLEVHYKEKNISQVLDMTVNDAVEFF
QHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGVGGGTIIATGTPEEVAANEASYTGHYLKGKLDHE

Nucleotide


Download         Length: 2832 bp        

>NTDB_id=453473 I6H78_RS06090 WP_198459126.1 1259968..1262799(+) (uvrA) [Streptococcus oralis strain FDAARGOS_1021]
ATGCAAGATAAAATTGTGATTCATGGGGCACGTGCCCATAACTTAAAAAATATCGATGTGGAGATTCCGCGAGACAAGCT
GGTTGTCGTGACTGGTTTGTCGGGTTCGGGGAAATCCAGTCTGGCCTTTGATACCCTCTATGCTGAGGGACAACGTCGTT
ATGTGGAGAGTTTGTCAGCCTATGCTCGCCAGTTCTTGGGCAATATGGAAAAACCAGACGTGGATGCCATTGACGGTCTT
AGCCCAGCTATTTCTATCGACCAGAAAACGACTAGCAAAAATCCACGTTCGACCGTGGGAACAACGACTGAAATCAACGA
TTATCTGCGTCTCCTCTACGCACGTGTGGGGACGCCTTACTGTATCAACGGGCACGGGGCTATCAATGCTTCTTCTGTAG
AGCAAATCGTGGATAAGGTCTTGGAATTGCCAGAACGTCAACGTCTGCAAATTTTAGCTCCTGTCATCCGTAAGAAAAAA
GGGCAACATAAGAGTATCATTGAAAAGGTTCAGAAAGACGGCTATGTCCGCGTCCGAGTGGATGGGGAGGTCTATGATGT
GACCGAAGTGCCAGAGTTGTCTAAGAGCAAACAACACAATATTGATGTCGTAGTCGACCGTATTGTTATCAAGGAGGGCA
TTCGTAGCCGTCTCTTTGACTCAATCGAGGCTGCCCTTCGTATTGCAGAAGGATACGTGATTATCGACACTATGGACGAT
TCGGAGTTGCTCTTCTCTGAGCATTATGCCTGTCCAGTTTGCGGCTTTACCGTACCAGAGTTAGAGCCTCGTCTCTTCTC
CTTCAATGCTCCGTTTGGCTCTTGTAGTGAGTGTGACGGTTTGGGTATCAAGCTAGAAGTGGATACTGATTTGGTAGTGC
CAGACGCCAGCAAAACTTTGCGTGATGGAGCCTTGGCACCTTGGAATCCTATCTCATCTAACTACTATCCAAACATGCTA
GAGCAGGCCATGACAGCCTTTGGAGTCGATATGGATAAGCCTTTTGAAGACTTGTCAGAAGAAGATAAGAACTTGATTCT
TTACGGCTCAGATGGCAAGGAATTCCATTTCCATTATGAAAATGAATTTGGTGGTGTGCGTGATATCGACATTCCGTTTG
AGGGGGTTGTCAATAATATCAAGCGTCGTTACCATGAAACCAATAGTGATTACACGCGCACCCAAATGCGTCTCTACATG
AATGAGTTGACTTGCGGGACTTGTCACGGCTACCGTCTCAATGACCAGGCCTTGTCTGTCCGTGTGGGTGGTGAGCAAGG
ACCACATATCGGTGAAATCTCAGACCTGTCTATCGCAGACCACTTGGACTTGGTGAGCCAGCTGACCTTGTCTGAAAATG
AAGCCATCATTGCTCGTCCCATTCTCAAGGAAATCAAGGATCGTTTGACCTTCCTTAATAACGTGGGTCTTAACTATTTG
ACTCTGTCACGTTCGGCAGGAACCCTTTCGGGTGGGGAGAGTCAGCGTATTCGCTTGGCAACCCAGATTGGGTCCAACCT
CTCAGGTGTCCTCTATATATTGGATGAGCCGTCAATCGGTCTCCACCAGAGGGATAATGACCGCCTGATTGCCAGTCTGA
AAAAGATGCGCGACTTGGGCAATACTCTCATTGTGGTAGAACATGACGAAGATACCATGCGCGAGGCGGATTATCTGATT
GACGTTGGTCCGGGTGCCGGTGTTTTTGGTGGAGAGATTGTTGCTGCAGGAACACCCAAGCAGGTGGCTCGCAACAGCAA
GTCTATCACAGGCCAGTACTTATCAGGGAAACGTGCCATTCCAGTGCCAGCAGAGCGTCGTTCCGGAAATGGTCGTTTTA
TCGAGGTGACAGGAGCGCGTGAGAACAACTTGCAAAATGTTACTGTCCGCTTCCCACTAGGAAAATTCATCGCCGTGACA
GGTGTATCGGGTTCAGGGAAGTCGACCTTAATCAACAGCATTCTCAAAAAAGCCATTGCTCAGAAGCTCAACCGTAATTC
AGACAAGCCTGGTAAATTCAAGACCATCACAGGGATTGAGCATGTAGACCGCTTGATTGATATTGACCAGAGTCCAATTG
GACGAACGCCAAGGTCTAACCCTGCTACCTATACAGGAGTTTTTGACGATATACGTGACCTCTTTGCCCAGACAAATGAA
GCCAAGATACGAGGCTACAAGAAGGGCCGTTTCAGTTTCAACGTCAAGGGTGGTCGTTGTGAAGCCTGCTCAGGTGACGG
GATTATCAAGATCGAGATGCACTTCTTACCAGATGTTTATGTGGCTTGTGAAGTCTGCCACGGAACCCGCTATAACAGTG
AAACCCTTGAAGTTCACTACAAGGAAAAGAATATCTCGCAGGTCTTGGACATGACCGTCAATGATGCAGTGGAATTTTTC
CAACACATTCCCAAGATTCAACGCAAACTTCAGACCATCAAGGATGTAGGGCTGGGCTATGTAACGTTAGGACAACCAGC
TACCACCCTTTCTGGGGGAGAAGCCCAGCGTATGAAGTTGGCTAGTGAGCTTCACAAACGCTCGACAGGTAAGTCTTTCT
ATATTCTGGATGAGCCAACGACAGGGCTTCATACTGAGGATATCGCTCGCTTGCTTAAAGTCTTAGCTCGCTTTGTCGAC
GATGGCAATACTGTCCTCGTCATTGAGCACAATCTGGATGTCATCAAGACGGCAGACCATATCATCGATTTGGGACCTGA
AGGTGGTGTTGGTGGAGGAACCATCATTGCAACAGGAACTCCAGAAGAAGTAGCGGCCAATGAAGCCAGCTACACAGGAC
ACTATTTGAAAGGAAAGTTAGATCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

98.409

100

0.984

  uvrA Streptococcus pneumoniae TIGR4

98.409

100

0.984

  uvrA Streptococcus pneumoniae D39

98.409

100

0.984