Detailed information NTG0453462

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6H78_RS05445
• Genome accession: NZ_CP066059
• Coordinates: 1120575..1121666 (-)
• Length: 363 a.a.
• NCBI ID: WP_198459035.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_1021
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1115575..1126666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H78_RS05430 (I6H78_05430)	-	1116033..1117655 (-)	1623	WP_000958793.1	ATP-binding cassette domain-containing protein	-
I6H78_RS05435 (I6H78_05435)	trpS	1117851..1118876 (+)	1026	WP_198459033.1	tryptophan--tRNA ligase	-
I6H78_RS05440 (I6H78_05440)	guaB	1119039..1120517 (+)	1479	WP_198459034.1	IMP dehydrogenase	-
I6H78_RS05445 (I6H78_05445)	recF	1120575..1121666 (-)	1092	WP_198459035.1	DNA replication/repair protein RecF	Machinery gene
I6H78_RS05450 (I6H78_05450)	yaaA	1121669..1122037 (-)	369	WP_198459036.1	S4 domain-containing protein YaaA	-
I6H78_RS05455 (I6H78_05455)	yfmF	1122198..1123448 (+)	1251	WP_198459037.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6H78_RS05460 (I6H78_05460)	yfmH	1123445..1124728 (+)	1284	WP_198459038.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6H78_RS05465 (I6H78_05465)	rodZ	1124764..1125585 (+)	822	WP_198459039.1	cytoskeleton protein RodZ	-
I6H78_RS05470 (I6H78_05470)	pgsA	1125596..1126141 (+)	546	WP_198459040.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 41776.93 Da
• Isoelectric Point: 9.0536

>NTDB_id=453462 I6H78_RS05445 WP_198459035.1 1120575..1121666(-) (recF) [Streptococcus oralis strain FDAARGOS_1021]
MWLQHLTIKTFRNYKEAKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDDEQLRLSGLLQKKTSS
IPLEIDLTPKGRVTKVNHLKQARLSDYIGHMNVVLFAPEDLQLIKGAPSVRRKFIDIELGQIKPIYLSDLSNYNHILKQR
NTYLKSSQNIDETFLSVLDDQLVEYGCRVIKHRIKFIKDLEKFGQKKHLEISNKLEELSISYQPSVNFTDEEQLTSSFKM
ALEKSRSRDLFKKNTGVGPHRDDITFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITNESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFNIQNGKISVN

Nucleotide

• Length: 1092 bp

>NTDB_id=453462 I6H78_RS05445 WP_198459035.1 1120575..1121666(-) (recF) [Streptococcus oralis strain FDAARGOS_1021]
ATGTGGCTCCAACATTTAACAATTAAAACCTTTCGAAACTACAAAGAGGCAAAAATTGATTTTAATCCAAAATTAAACGT
CTTTCTAGGTCAAAATGCACAAGGAAAAACCAATATTCTAGAAGCAATCTATTTCTTAGCCTTGACACGTAGTCATCGGA
CTCGTACAGATAAAAATCTCATTCATTTTGATGACGAGCAACTCCGTCTTTCTGGCTTGCTACAGAAAAAAACAAGCTCT
ATCCCTCTAGAAATTGATTTAACGCCAAAAGGGCGTGTGACTAAGGTCAATCACTTAAAACAAGCTCGCCTATCAGACTA
CATCGGACATATGAATGTTGTCCTCTTCGCACCTGAAGATCTCCAGCTAATTAAGGGAGCACCTTCTGTCCGTCGAAAAT
TTATAGACATTGAACTGGGACAAATTAAACCAATCTACTTGTCAGACTTATCAAACTATAACCATATACTCAAGCAAAGA
AATACTTACCTAAAATCCAGCCAGAATATTGATGAAACATTTCTGTCAGTATTAGATGATCAGTTAGTAGAGTATGGATG
TCGCGTTATAAAGCATCGAATAAAATTCATTAAAGACTTAGAGAAATTTGGTCAAAAAAAACACTTAGAAATTTCAAATA
AATTAGAAGAGTTGTCAATATCTTATCAACCATCTGTCAACTTCACTGATGAAGAACAGCTAACAAGTTCTTTTAAAATG
GCTTTAGAGAAAAGTAGATCAAGAGATTTGTTCAAAAAGAATACTGGCGTCGGCCCTCATCGAGATGACATTACTTTCTA
TATCAATGGTATGGACGCTAGTTTTGGAAGCCAAGGTCAACATCGTAGTCTTGTACTTTCTATCAAACTAGCAGAGATTG
AACTAATGGAAAGCATTACTAACGAGTCTCCGATACTACTGCTTGATGATGTTATGAGCGAACTTGACAATACACGGCAA
CTAAAATTACTAGAAACCATTTCTCAATCTATCCAAACCTTTATCACAACAACAAGTTTAGACCACTTACAAAACTTGCC
AGAAAACCTTAGTATTTTCAATATTCAAAACGGTAAAATTTCTGTAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	88.43	100	0.884
recF	Bacillus subtilis subsp. subtilis str. 168	45.924	100	0.466