Detailed information NTG0452702

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HUF19_RS01725
• Genome accession: NZ_CP054475
• Coordinates: 428361..429458 (+)
• Length: 365 a.a.
• NCBI ID: WP_366516530.1
• Uniprot ID: -
• Organism: Thalassolituus hydrocarboniclasticus strain alknpb1M-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 423361..434458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUF19_RS01715 (HUF19_01715)	-	424214..425617 (+)	1404	WP_260998220.1	FAD-binding oxidoreductase	-
HUF19_RS01720 (HUF19_01720)	-	425720..428155 (-)	2436	WP_260998221.1	penicillin-binding protein 1A	-
HUF19_RS01725 (HUF19_01725)	pilM	428361..429458 (+)	1098	WP_366516530.1	pilus assembly protein PilM	Machinery gene
HUF19_RS01730 (HUF19_01730)	-	429458..430006 (+)	549	WP_260998222.1	PilN domain-containing protein	-
HUF19_RS01735 (HUF19_01735)	pilO	430011..430652 (+)	642	WP_260998223.1	type 4a pilus biogenesis protein PilO	-
HUF19_RS01740 (HUF19_01740)	-	430654..431193 (+)	540	WP_260998224.1	pilus assembly protein PilP	-
HUF19_RS01745 (HUF19_01745)	pilQ	431225..433288 (+)	2064	WP_260998225.1	type IV pilus secretin PilQ family protein	Machinery gene
HUF19_RS01750 (HUF19_01750)	aroK	433292..433807 (+)	516	WP_260998226.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 39953.96 Da
• Isoelectric Point: 4.2157

>NTDB_id=452702 HUF19_RS01725 WP_366516530.1 428361..429458(+) (pilM) [Thalassolituus hydrocarboniclasticus strain alknpb1M-1]
MQVREFDGDFVVLANLFNKKNKAILGVDISSTSVKVLELSRNNDRYQVEAYAAEPLPANAVVEQSISNDEAVGEAIRRAL
SRSRASAKRAAIAVAGSAVITKTVQMNGKLKDDEMDFQIRAEADQYIPYPLEEVALDWEIQGPSDSGNDMVDVLLAACRS
ETVERRKDAVEYANLEAAVVDVEAFCTERAFSLLAGQLDGDEIETVAILDIGATMTTLSVLHEGKSIYTREQLFGGKQLS
EDIMRRYGLSEEEATRAKLEGGLPDDYESEVLEPFRRAVVQQVSRSLQFFYSSSQFNDVDYIILAGGTSSIPYLSDQVQD
AMGIATVIANPFVNMTLSQKVNANLLNGDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1098 bp

>NTDB_id=452702 HUF19_RS01725 WP_366516530.1 428361..429458(+) (pilM) [Thalassolituus hydrocarboniclasticus strain alknpb1M-1]
GTGCAAGTTCGCGAATTTGATGGGGATTTTGTCGTGCTGGCTAACTTGTTTAATAAGAAGAACAAGGCAATTCTTGGGGT
GGATATCAGTTCCACCTCAGTGAAAGTCCTTGAGTTGAGTCGCAATAACGATCGCTATCAGGTTGAAGCTTATGCCGCTG
AACCCCTGCCAGCCAATGCCGTGGTGGAACAAAGCATCAGCAATGACGAAGCGGTTGGCGAGGCGATACGCCGTGCTCTG
AGCCGCTCCCGTGCCAGCGCCAAGCGTGCTGCTATTGCTGTAGCCGGCTCTGCGGTCATCACCAAAACCGTACAGATGAA
CGGCAAACTGAAAGACGATGAAATGGACTTTCAGATCCGTGCAGAAGCTGACCAGTACATTCCTTATCCGCTGGAAGAAG
TTGCGCTGGACTGGGAAATCCAGGGGCCGTCCGATTCTGGCAATGATATGGTGGACGTTCTGCTGGCGGCCTGTCGTTCT
GAAACCGTTGAGCGCCGTAAAGATGCGGTTGAGTACGCCAACCTTGAAGCTGCGGTTGTGGATGTTGAAGCCTTCTGTAC
CGAACGCGCCTTCTCGTTATTGGCAGGTCAGCTGGATGGTGATGAGATTGAAACCGTCGCTATCCTGGATATCGGTGCCA
CGATGACCACGCTCAGCGTGCTGCATGAAGGCAAATCTATCTATACCCGTGAACAGTTATTCGGTGGCAAGCAGCTGAGC
GAAGATATCATGCGTCGTTATGGCCTCAGCGAAGAGGAAGCCACGCGTGCCAAGCTGGAAGGCGGTCTGCCGGATGATTA
CGAAAGCGAAGTGCTTGAGCCTTTCCGCCGTGCTGTGGTGCAGCAGGTCAGCCGGTCGCTGCAGTTTTTCTACTCGTCCA
GTCAGTTTAATGATGTGGATTACATTATTCTTGCTGGTGGTACATCTTCTATCCCTTATCTGTCTGATCAGGTGCAGGAT
GCGATGGGTATCGCCACTGTGATTGCCAATCCTTTTGTGAATATGACGCTGTCGCAGAAAGTTAACGCTAATCTGCTGAA
TGGCGACGCGCCTTCATTGATGATTGCGTGTGGGCTGGCGATGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (26-364)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	54.857	95.89	0.526
comM	Acinetobacter nosocomialis M2	54.857	95.89	0.526
comM	Acinetobacter baylyi ADP1	50.708	96.712	0.49
pilM	Legionella pneumophila strain ERS1305867	43.785	96.986	0.425