Detailed information NTG0451414

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HQ939_RS11730
• Genome accession: NZ_CP054198
• Coordinates: 2388856..2389983 (+)
• Length: 375 a.a.
• NCBI ID: WP_173632100.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain YHP170504
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2383856..2394983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQ939_RS11705 (HQ939_11725)	selA	2384454..2385836 (-)	1383	WP_173632098.1	L-seryl-tRNA(Sec) selenium transferase	-
HQ939_RS11715 (HQ939_11735)	-	2386276..2387217 (-)	942	WP_173632099.1	hypothetical protein	-
HQ939_RS11720 (HQ939_11740)	rfaD	2387309..2388235 (-)	927	WP_021110191.1	ADP-glyceromanno-heptose 6-epimerase	-
HQ939_RS11725 (HQ939_11745)	def	2388247..2388759 (-)	513	WP_005712670.1	peptide deformylase	-
HQ939_RS11730 (HQ939_11750)	dprA	2388856..2389983 (+)	1128	WP_173632100.1	DNA-processing protein DprA	Machinery gene
HQ939_RS11735 (HQ939_11755)	-	2390036..2390872 (+)	837	WP_010787337.1	heme/hemin ABC transporter substrate-binding protein	-
HQ939_RS11740 (HQ939_11760)	-	2390872..2391858 (+)	987	WP_042905495.1	FecCD family ABC transporter permease	-
HQ939_RS11745 (HQ939_11765)	-	2391858..2392646 (+)	789	WP_075605108.1	heme ABC transporter ATP-binding protein	-
HQ939_RS11750 (HQ939_11770)	-	2392755..2393555 (+)	801	WP_075606389.1	ChaN family lipoprotein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41589.70 Da
• Isoelectric Point: 5.8020

>NTDB_id=451414 HQ939_RS11730 WP_173632100.1 2388856..2389983(+) (dprA) [Glaesserella parasuis strain YHP170504]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQQILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVATSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSAPKLAKKLPEL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=451414 HQ939_RS11730 WP_173632100.1 2388856..2389983(+) (dprA) [Glaesserella parasuis strain YHP170504]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGCGTTACAATGGGCGGAACAGGATCAGCAACAGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGCTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGTCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCATAAAAAACTTGCTGAACA
AATCGTTGCAACAAGCGGTGCGTTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTTCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTCGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGAGAGAAGTCTTTGCATTGCCGAACGCAGTTCAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAATCAGTGCATA
TTCAACCAAGCCTGTTTGATACGAAACCTAAACAAGCGGTGAAATCTGCCCCAAAATTGGCAAAAAAACTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (314-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.6	100	0.976
dprA	Haemophilus influenzae Rd KW20	52.819	89.867	0.475
dprA	Vibrio campbellii strain DS40M4	47.721	99.467	0.475
dprA	Vibrio cholerae strain A1552	43.883	100	0.44
dprA	Legionella pneumophila strain ERS1305867	38.095	100	0.384
dprA	Neisseria gonorrhoeae MS11	43.175	84	0.363