Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HR084_RS07570 Genome accession   NZ_CP054177
Coordinates   1456225..1456689 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain JCL16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1451225..1461689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS07550 (HR084_07550) kinA 1451692..1453512 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  HR084_RS07555 (HR084_07555) dapX 1453522..1454703 (-) 1182 WP_173614057.1 aminotransferase A -
  HR084_RS07560 (HR084_07560) - 1454905..1455066 (-) 162 WP_173614058.1 hypothetical protein -
  HR084_RS07565 (HR084_07565) cheV 1455270..1456181 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  HR084_RS07570 (HR084_07570) kre 1456225..1456689 (-) 465 WP_003232406.1 YkyB family protein Regulator
  HR084_RS07575 (HR084_07575) ykuC 1456815..1458107 (-) 1293 WP_080529265.1 MFS transporter -
  HR084_RS07580 (HR084_07580) ltdD 1458183..1458677 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  HR084_RS07585 (HR084_07585) ppeE 1458734..1459594 (-) 861 WP_003232400.1 metallophosphoesterase -
  HR084_RS07590 (HR084_07590) fadH 1459738..1460502 (+) 765 WP_080529266.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=451319 HR084_RS07570 WP_003232406.1 1456225..1456689(-) (kre) [Bacillus subtilis strain JCL16]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=451319 HR084_RS07570 WP_003232406.1 1456225..1456689(-) (kre) [Bacillus subtilis strain JCL16]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1