Detailed information NTG0451110

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: HQN60_RS05805
• Genome accession: NZ_CP054143
• Coordinates: 1197196..1198689 (-)
• Length: 497 a.a.
• NCBI ID: WP_173532771.1
• Uniprot ID: A0A6M8SX30
• Organism: Deefgea piscis strain D17
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1192196..1203689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQN60_RS05790 (HQN60_05790)	-	1192608..1193441 (-)	834	WP_173532768.1	transporter substrate-binding domain-containing protein	-
HQN60_RS16440	-	1194072..1194332 (+)	261	Protein_1107	methyl-accepting chemotaxis protein	-
HQN60_RS16445	-	1194489..1194740 (+)	252	WP_247646742.1	CZB domain-containing protein	-
HQN60_RS05800 (HQN60_05800)	parE	1194928..1196901 (-)	1974	WP_173532770.1	DNA topoisomerase IV subunit B	-
HQN60_RS05805 (HQN60_05805)	comM	1197196..1198689 (-)	1494	WP_173532771.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
HQN60_RS05810 (HQN60_05810)	-	1198747..1199742 (+)	996	WP_173532772.1	sensor histidine kinase	-
HQN60_RS05815 (HQN60_05815)	-	1199745..1200515 (+)	771	WP_173532773.1	LytTR family DNA-binding domain-containing protein	-
HQN60_RS05820 (HQN60_05820)	-	1200505..1200921 (+)	417	WP_247646443.1	DUF2721 domain-containing protein	-
HQN60_RS05825 (HQN60_05825)	-	1200952..1201353 (-)	402	WP_173532774.1	diacylglycerol kinase	-
HQN60_RS05830 (HQN60_05830)	-	1201337..1202071 (-)	735	WP_173532775.1	BPSS1780 family membrane protein	-
HQN60_RS05835 (HQN60_05835)	-	1202216..1203406 (-)	1191	WP_173532776.1	acetate/propionate family kinase	-

Sequence

Protein

• Length: 497 a.a.
• Molecular weight: 52959.88 Da
• Isoelectric Point: 7.5393

>NTDB_id=451110 HQN60_RS05805 WP_173532771.1 1197196..1198689(-) (comM) [Deefgea piscis strain D17]
MSLAVLYSRALDGLSAQSVTVEVHLANGLPAFNLVGLADTEVRESRERVRAALQVVGFEFPNRRITVNLAPADLPKGAGH
YDLAIAVGILAASGQLPCEHLADYEFAGELGLTGQLRSVRGGLALAMAARDAQRTLIISASSSNEAALIQNATILSAAHL
LEVCHHLSGTQSLVTALAPTDRESPIYPDLADVKGQSAARRGLEVAAAGNHSLLLIGPPGTGKSMLAQRLPGLLPPLLEC
EALEAAAIQSLGQNGLDLRSVGQRPFRSPHHTASSVALVGGGSIPQPGEISLAHHGVLFLDELPEFDRKVLEVLREPLES
GKIHISRAARQAEFPARFQLVAAMNPCPCGYLGHLKKACRCTPEQVLRYRGRISGPLLDRIDMVVEVPAIPDTVLLAKGQ
SEGSLLVRERVCAARARQLARQGHNNSTLLGAAMETHCQTDAAGLAMLQNAIQKLAWSARAYHRVLRVARTIADLADSET
ILTPHLAEAIQYRRGIE

Nucleotide

• Length: 1494 bp

>NTDB_id=451110 HQN60_RS05805 WP_173532771.1 1197196..1198689(-) (comM) [Deefgea piscis strain D17]
ATGTCGCTTGCCGTTTTGTATTCTCGAGCATTAGATGGCTTATCTGCGCAGTCAGTTACTGTTGAGGTTCATTTGGCTAA
TGGCTTACCTGCATTTAATTTGGTGGGCTTGGCTGATACTGAAGTTCGTGAATCTCGAGAACGAGTTCGAGCGGCTTTGC
AAGTCGTTGGTTTTGAATTTCCTAATCGCCGAATTACCGTAAATTTAGCGCCAGCCGATTTACCCAAAGGGGCAGGGCAT
TATGATTTAGCAATTGCGGTTGGCATATTAGCTGCGAGCGGGCAATTGCCCTGTGAGCATTTAGCGGATTATGAATTTGC
CGGTGAATTAGGTTTAACTGGTCAATTACGCTCGGTGCGCGGTGGCTTGGCATTGGCCATGGCGGCGCGTGATGCGCAGC
GAACATTGATTATTAGTGCCAGTAGTAGTAATGAAGCCGCATTAATTCAAAATGCAACGATATTGTCTGCTGCGCATTTA
CTTGAAGTTTGCCACCATCTGAGTGGTACTCAATCTTTGGTTACAGCTTTAGCGCCAACGGATAGAGAAAGCCCAATTTA
TCCTGATTTAGCTGATGTGAAAGGGCAGTCTGCCGCTCGGCGTGGTCTTGAGGTGGCCGCTGCTGGCAATCACTCATTAT
TGCTGATTGGCCCACCAGGGACGGGTAAATCAATGCTGGCACAGCGGCTACCGGGTTTATTACCGCCATTATTAGAATGT
GAAGCGCTAGAGGCGGCCGCAATACAATCTTTAGGACAAAATGGGCTTGATTTGCGCAGTGTTGGCCAGCGGCCCTTTCG
TAGCCCGCATCATACGGCGTCCAGCGTTGCTTTAGTCGGTGGTGGCAGTATTCCGCAACCCGGAGAGATCTCACTGGCGC
ATCACGGAGTTCTTTTTTTAGATGAGCTACCCGAATTCGATCGAAAAGTTTTAGAGGTTTTGCGAGAGCCGCTTGAGAGC
GGAAAAATTCATATTTCACGCGCAGCACGGCAAGCTGAATTTCCGGCGCGATTTCAGCTGGTGGCGGCGATGAATCCCTG
TCCTTGTGGATATTTAGGACACCTGAAGAAAGCATGTCGTTGCACGCCAGAACAAGTGCTGCGCTATCGAGGTCGCATTT
CTGGGCCATTACTTGATCGTATTGATATGGTGGTCGAAGTACCGGCGATTCCTGATACGGTGTTATTGGCTAAAGGGCAA
AGTGAAGGCAGTCTATTAGTGCGTGAACGAGTTTGTGCCGCACGTGCGCGGCAGTTAGCACGGCAAGGCCATAATAATTC
GACTTTACTTGGCGCGGCAATGGAGACACATTGCCAAACGGATGCAGCAGGTTTGGCAATGTTGCAAAATGCGATTCAAA
AATTAGCCTGGTCGGCGCGGGCTTATCACCGAGTATTGCGCGTAGCCCGAACGATTGCTGATTTAGCCGATAGTGAGACG
ATTTTAACGCCGCATCTGGCTGAAGCAATCCAATATCGTCGGGGTATTGAGTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-391)

• Subunit ChlI of Mg-chelatase (ChlI) (21-139)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

3D structure

• AlphaFold DB: A0A6M8SX30

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	52.727	99.598	0.525
comM	Vibrio campbellii strain DS40M4	52.323	99.598	0.521
comM	Haemophilus influenzae Rd KW20	51.703	100	0.519
comM	Glaesserella parasuis strain SC1401	50.301	100	0.505
comM	Legionella pneumophila str. Paris	49.9	100	0.501
comM	Legionella pneumophila strain ERS1305867	49.9	100	0.501
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.219	100	0.457