Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   I6G27_RS07420 Genome accession   NZ_CP065751
Coordinates   1684729..1685352 (-) Length   207 a.a.
NCBI ID   WP_062330519.1    Uniprot ID   A0A378Q9T5
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1679729..1690352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS07400 (I6G27_07400) kdsB 1680497..1681291 (-) 795 WP_062330527.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  I6G27_RS07405 (I6G27_07405) lpxK 1681313..1682416 (-) 1104 WP_062330525.1 tetraacyldisaccharide 4'-kinase -
  I6G27_RS07410 (I6G27_07410) msbA 1682416..1684179 (-) 1764 WP_062330522.1 lipid A export permease/ATP-binding protein MsbA -
  I6G27_RS07415 (I6G27_07415) - 1684243..1684698 (-) 456 WP_062330521.1 biopolymer transporter ExbD -
  I6G27_RS07420 (I6G27_07420) exbB 1684729..1685352 (-) 624 WP_062330519.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  I6G27_RS07425 (I6G27_07425) - 1685416..1686564 (-) 1149 WP_062330517.1 ParB/RepB/Spo0J family partition protein -
  I6G27_RS07430 (I6G27_07430) - 1686743..1687543 (-) 801 WP_062330515.1 ParA family protein -
  I6G27_RS07435 (I6G27_07435) rsmG 1687645..1688292 (-) 648 WP_062330513.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  I6G27_RS07440 (I6G27_07440) sthA 1688292..1689986 (-) 1695 WP_227713348.1 Si-specific NAD(P)(+) transhydrogenase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22628.95 Da        Isoelectric Point: 5.9898

>NTDB_id=451107 I6G27_RS07420 WP_062330519.1 1684729..1685352(-) (exbB) [Moraxella osloensis strain FDAARGOS_870]
MWELVKAGGWLMWPIVLCSILMLIIIIERAIKLKASTVIPAHLREQLMQRLIEQGDIDRESLENVKLNSPLGDILASGLM
NRQHGIDSMTMHMENRASIAIHQLEKHINMLGTIGAIAPLLGLLGTVLGIISSFLAITEGAMQDPTMLAAGVSQALITTA
GGMLVAIPAVMAYRIFQRRIIDINAAFEQEAGLMMQELLDNGLITPR

Nucleotide


Download         Length: 624 bp        

>NTDB_id=451107 I6G27_RS07420 WP_062330519.1 1684729..1685352(-) (exbB) [Moraxella osloensis strain FDAARGOS_870]
ATGTGGGAATTAGTTAAAGCAGGCGGTTGGTTGATGTGGCCCATTGTCCTATGTTCGATTTTGATGTTGATTATCATCAT
TGAGCGCGCGATAAAACTTAAAGCCAGTACAGTGATACCCGCCCATCTGCGTGAACAATTGATGCAGCGGCTGATTGAGC
AGGGCGATATTGATCGTGAATCGCTTGAGAATGTCAAACTCAATTCGCCTTTGGGTGATATCCTCGCTTCTGGACTCATG
AATCGCCAGCATGGGATTGATTCAATGACCATGCATATGGAAAACCGCGCCAGTATCGCCATTCACCAATTAGAAAAACA
TATCAACATGTTGGGCACCATCGGTGCTATCGCGCCATTGCTGGGGCTTTTAGGTACTGTACTGGGGATTATTTCATCAT
TCTTAGCCATTACTGAAGGCGCAATGCAAGATCCGACCATGCTGGCAGCTGGCGTATCGCAAGCGCTGATTACCACAGCA
GGGGGCATGCTGGTTGCGATACCTGCAGTGATGGCGTACCGTATTTTTCAGCGCCGTATCATTGATATCAATGCCGCGTT
TGAACAAGAAGCGGGTTTGATGATGCAAGAATTACTGGACAATGGTCTAATCACGCCTCGTTAA

Domains

Predicted by InterProScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(68-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378Q9T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

48.168

92.271

0.444