Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   I6G27_RS05285 Genome accession   NZ_CP065751
Coordinates   1184931..1185347 (+) Length   138 a.a.
NCBI ID   WP_062331500.1    Uniprot ID   A0A378Q8D3
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1179931..1190347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS05275 (I6G27_05275) - 1180214..1184350 (+) 4137 WP_082741404.1 PilC/PilY family type IV pilus protein -
  I6G27_RS10970 (I6G27_05280) - 1184371..1184931 (+) 561 WP_269465434.1 type IV pilin protein -
  I6G27_RS05285 (I6G27_05285) pilE 1184931..1185347 (+) 417 WP_062331500.1 type IV pilin protein Machinery gene
  I6G27_RS05290 (I6G27_05290) - 1185673..1186950 (-) 1278 WP_062331497.1 O-antigen ligase -
  I6G27_RS05295 (I6G27_05295) pilA2 1186950..1187453 (-) 504 WP_156627541.1 pilin Machinery gene
  I6G27_RS05300 (I6G27_05300) - 1187923..1189722 (+) 1800 WP_062331493.1 PglL family O-oligosaccharyltransferase -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15119.37 Da        Isoelectric Point: 9.9382

>NTDB_id=451099 I6G27_RS05285 WP_062331500.1 1184931..1185347(+) (pilE) [Moraxella osloensis strain FDAARGOS_870]
MKNRYRQQGFTLIELMIVVAIIGILAAIAYPSYQRYVIKTKRTDMMAEMQNIASQIESRKLAQGSYTNAGTGLDGSFPRS
GTALYTITLAPTPLTNRWTITATPISSSQMATDGTLTLNAQGVKCRNTSCGMGQEWNN

Nucleotide


Download         Length: 417 bp        

>NTDB_id=451099 I6G27_RS05285 WP_062331500.1 1184931..1185347(+) (pilE) [Moraxella osloensis strain FDAARGOS_870]
ATGAAAAATCGATATCGCCAACAAGGCTTTACCCTAATCGAGCTGATGATAGTGGTGGCTATCATCGGTATATTGGCGGC
GATTGCGTATCCAAGCTATCAACGCTACGTGATCAAGACCAAACGCACTGATATGATGGCAGAAATGCAAAATATCGCCT
CACAGATTGAATCACGTAAACTGGCACAAGGCAGTTACACGAACGCAGGCACGGGATTAGATGGGAGCTTCCCTAGAAGT
GGTACAGCATTATATACCATCACCCTAGCACCCACCCCCCTCACTAACCGTTGGACAATTACAGCGACACCTATTAGTTC
ATCGCAGATGGCAACTGATGGTACGCTCACGCTAAACGCGCAAGGAGTCAAGTGCCGAAATACCTCATGTGGTATGGGTC
AAGAATGGAATAACTAG

Domains

Predicted by InterProScan.

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(31-110)

Prokaryotic N-terminal methylation motif (N_methyl)

(6-30)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378Q8D3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Acinetobacter baumannii D1279779

50.407

89.13

0.449
  comF Acinetobacter baylyi ADP1

50.413

87.681

0.442
  comE Acinetobacter baylyi ADP1

31.765

100

0.391
  pilA Vibrio cholerae O1 biovar El Tor strain E7946

41.463

89.13

0.37
  pilA Vibrio cholerae strain A1552

41.463

89.13

0.37
  pilA Vibrio cholerae C6706

41.463

89.13

0.37