Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   STCNRZ1202_RS02140 Genome accession   NZ_CP065506
Coordinates   387148..387405 (+) Length   85 a.a.
NCBI ID   WP_065973174.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 382148..392405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS02120 (STCNRZ1202_02135) - 383234..383692 (-) 459 WP_347229682.1 protein rep -
  STCNRZ1202_RS02125 (STCNRZ1202_02140) hdcB 383836..384270 (-) 435 WP_084829529.1 histidine decarboxylase maturation protein HdcB -
  STCNRZ1202_RS02130 (STCNRZ1202_02145) - 384287..385750 (-) 1464 WP_232990980.1 amino acid permease -
  STCNRZ1202_RS02135 (STCNRZ1202_02150) hdcA 385774..386709 (-) 936 WP_180478416.1 histidine decarboxylase, pyruvoyl type -
  STCNRZ1202_RS02140 (STCNRZ1202_02155) prx 387148..387405 (+) 258 WP_065973174.1 hypothetical protein Regulator
  STCNRZ1202_RS02145 (STCNRZ1202_02160) - 387524..390601 (+) 3078 WP_347229683.1 HsdR family type I site-specific deoxyribonuclease -
  STCNRZ1202_RS02150 (STCNRZ1202_02165) - 390601..392196 (+) 1596 WP_347229684.1 type I restriction-modification system subunit M -

Sequence

Protein


Download         Length: 85 a.a.        Molecular weight: 9841.40 Da        Isoelectric Point: 5.6617

>NTDB_id=449750 STCNRZ1202_RS02140 WP_065973174.1 387148..387405(+) (prx) [Streptococcus thermophilus strain CNRZ1202]
MLTYDEFKEAMDKGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELADELGVSKTYIEKIIRVVNIHS
ELLKR

Nucleotide


Download         Length: 258 bp        

>NTDB_id=449750 STCNRZ1202_RS02140 WP_065973174.1 387148..387405(+) (prx) [Streptococcus thermophilus strain CNRZ1202]
ATGCTAACCTATGATGAATTTAAAGAGGCTATGGACAAGGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGTAAGATACATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACGAAATATTAAGCTTAGAAAAGGTATCGGATA
TAATAAAGGAGTTAGCGGACGAGTTAGGCGTTAGTAAGACATATATAGAAAAAATCATACGAGTAGTCAATATTCATTCA
GAACTACTTAAAAGATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

68.235

0.4
  prx Streptococcus pyogenes MGAS315

57.627

69.412

0.4
  prx Streptococcus pyogenes MGAS8232

57.627

69.412

0.4
  prx Streptococcus pyogenes MGAS315

56.897

68.235

0.388
  prx Streptococcus pyogenes MGAS315

73.81

49.412

0.365