Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   FOC96_RS12630 Genome accession   NZ_CP053965
Coordinates   1739970..1740404 (+) Length   144 a.a.
NCBI ID   WP_000811492.1    Uniprot ID   A0A0G8EA73
Organism   Bacillus cereus strain FDAARGOS_802     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1734970..1745404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC96_RS12610 (FOC96_12605) - 1735859..1737022 (-) 1164 WP_000434590.1 aminotransferase A -
  FOC96_RS12615 (FOC96_12610) - 1737145..1737345 (-) 201 WP_000929284.1 hypothetical protein -
  FOC96_RS12620 (FOC96_12615) kinB 1737656..1738930 (+) 1275 WP_000420389.1 sporulation sensor histidine kinase KinB -
  FOC96_RS12625 (FOC96_12620) - 1738984..1739733 (-) 750 WP_000388464.1 DUF3967 domain-containing protein -
  FOC96_RS12630 (FOC96_12625) nucA/comI 1739970..1740404 (+) 435 WP_000811492.1 DNA-entry nuclease Machinery gene
  FOC96_RS12635 (FOC96_12630) comJ 1740441..1740830 (+) 390 WP_001995060.1 competence protein ComJ -
  FOC96_RS12640 (FOC96_12635) metE 1740867..1743155 (-) 2289 WP_001007632.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  FOC96_RS12645 (FOC96_12640) - 1744083..1744640 (-) 558 WP_000062080.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16012.35 Da        Isoelectric Point: 8.4331

>NTDB_id=449523 FOC96_RS12630 WP_000811492.1 1739970..1740404(+) (nucA/comI) [Bacillus cereus strain FDAARGOS_802]
MKQLKGIIISIIAILSILVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=449523 FOC96_RS12630 WP_000811492.1 1739970..1740404(+) (nucA/comI) [Bacillus cereus strain FDAARGOS_802]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTTTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCGAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAG
TTATCGTTAGCTCCGTACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0G8EA73

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556