Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   STT19_RS03725 Genome accession   NZ_CP065487
Coordinates   698740..699387 (-) Length   215 a.a.
NCBI ID   WP_041827674.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST19     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 693740..704387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT19_RS03700 (STT19_03695) - 693989..695238 (-) 1250 Protein_668 ISL3 family transposase -
  STT19_RS03705 (STT19_03700) - 695427..696806 (+) 1380 WP_179971285.1 serine hydrolase -
  STT19_RS03710 (STT19_03705) cclA/cilC 696847..697494 (-) 648 WP_041827674.1 A24 family peptidase Machinery gene
  STT19_RS03715 (STT19_03710) - 697603..698124 (+) 522 WP_011680999.1 Dps family protein -
  STT19_RS03720 (STT19_03715) - 698139..698699 (+) 561 Protein_672 serine hydrolase -
  STT19_RS03725 (STT19_03720) cclA/cilC 698740..699387 (-) 648 WP_041827674.1 A24 family peptidase Machinery gene
  STT19_RS03730 (STT19_03725) - 699496..700017 (+) 522 WP_014608172.1 Dps family protein -
  STT19_RS03735 (STT19_03730) - 700106..700543 (+) 438 WP_260224149.1 Fur family transcriptional regulator -
  STT19_RS03740 (STT19_03735) - 700654..700860 (+) 207 WP_022096801.1 YqgQ family protein -
  STT19_RS03745 (STT19_03740) - 700853..701821 (+) 969 WP_260224148.1 ROK family glucokinase -
  STT19_RS03750 (STT19_03745) typA 701959..703806 (+) 1848 WP_167401470.1 translational GTPase TypA -
  STT19_RS03755 (STT19_03750) - 703830..704102 (+) 273 WP_002950398.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 24886.02 Da        Isoelectric Point: 8.5469

>NTDB_id=448416 STT19_RS03725 WP_041827674.1 698740..699387(-) (cclA/cilC) [Streptococcus thermophilus strain ST19]
MLSILYFFLGTSLGSFIGLICDRFPEKSIIFPRSHCNQCGHPLRFFEMIPILSQLFLRFKCRLCQSSIPYRYLFLELFCG
GILLLYFYNYLDFGRTYLLFFSLCLTIFDLKNKSYPLLIWILGTLPLLCLGNHYLTFSLGISLAVLSYIKRLNIGEGDFL
YLASVSLIFPFSKILIAIELACSFGLMYFLVRKNPNETVAFVPFLFMSVLILTFM

Nucleotide


Download         Length: 648 bp        

>NTDB_id=448416 STT19_RS03725 WP_041827674.1 698740..699387(-) (cclA/cilC) [Streptococcus thermophilus strain ST19]
ATGCTTAGTATTTTATATTTTTTTCTTGGTACCTCTTTAGGCTCGTTTATTGGATTGATTTGTGATCGTTTTCCTGAGAA
GTCGATTATTTTTCCTAGAAGCCATTGCAATCAGTGTGGGCATCCGTTACGTTTTTTCGAAATGATTCCGATCCTATCAC
AACTTTTCTTAAGGTTCAAATGTCGGTTATGTCAAAGCTCTATCCCATACCGTTATCTCTTCTTGGAATTGTTTTGTGGA
GGAATACTTCTTCTTTATTTCTATAACTACCTAGATTTTGGAAGAACCTATTTGCTTTTTTTCAGTCTTTGTCTAACTAT
TTTTGATTTAAAAAATAAATCATATCCCCTTCTAATTTGGATTCTTGGAACACTACCTCTCCTATGTTTGGGAAACCACT
ACCTCACTTTTAGCTTAGGAATAAGTTTAGCCGTTCTGTCATATATCAAACGTTTAAATATTGGTGAAGGTGATTTTCTC
TATTTGGCCAGTGTCTCCCTCATTTTCCCATTTTCCAAAATACTAATAGCTATTGAACTAGCTTGCTCATTTGGGCTTAT
GTACTTCCTAGTACGTAAAAACCCTAATGAAACAGTCGCTTTTGTCCCATTTCTCTTTATGAGTGTTCTAATTCTTACCT
TCATGTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

39.72

99.535

0.395
  cclA/cilC Streptococcus pneumoniae TIGR4

39.72

99.535

0.395
  cclA/cilC Streptococcus mitis NCTC 12261

39.252

99.535

0.391
  cclA/cilC Streptococcus pneumoniae Rx1

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae D39

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae R6

38.785

99.535

0.386