Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   STT19_RS03710 Genome accession   NZ_CP065487
Coordinates   696847..697494 (-) Length   215 a.a.
NCBI ID   WP_041827674.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST19     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 691847..702494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STT19_RS03690 (STT19_03685) holA 692177..693211 (+) 1035 WP_002946639.1 DNA polymerase III subunit delta -
  STT19_RS03695 (STT19_03690) sodA 693306..693911 (+) 606 WP_011680996.1 superoxide dismutase SodA -
  STT19_RS03700 (STT19_03695) - 693989..695238 (-) 1250 Protein_668 ISL3 family transposase -
  STT19_RS03705 (STT19_03700) - 695427..696806 (+) 1380 WP_179971285.1 serine hydrolase -
  STT19_RS03710 (STT19_03705) cclA/cilC 696847..697494 (-) 648 WP_041827674.1 A24 family peptidase Machinery gene
  STT19_RS03715 (STT19_03710) - 697603..698124 (+) 522 WP_011680999.1 Dps family protein -
  STT19_RS03720 (STT19_03715) - 698139..698699 (+) 561 Protein_672 serine hydrolase -
  STT19_RS03725 (STT19_03720) cclA/cilC 698740..699387 (-) 648 WP_041827674.1 A24 family peptidase Machinery gene
  STT19_RS03730 (STT19_03725) - 699496..700017 (+) 522 WP_014608172.1 Dps family protein -
  STT19_RS03735 (STT19_03730) - 700106..700543 (+) 438 WP_260224149.1 Fur family transcriptional regulator -
  STT19_RS03740 (STT19_03735) - 700654..700860 (+) 207 WP_022096801.1 YqgQ family protein -
  STT19_RS03745 (STT19_03740) - 700853..701821 (+) 969 WP_260224148.1 ROK family glucokinase -

Sequence

Protein


Download         Length: 215 a.a.        Molecular weight: 24886.02 Da        Isoelectric Point: 8.5469

>NTDB_id=448415 STT19_RS03710 WP_041827674.1 696847..697494(-) (cclA/cilC) [Streptococcus thermophilus strain ST19]
MLSILYFFLGTSLGSFIGLICDRFPEKSIIFPRSHCNQCGHPLRFFEMIPILSQLFLRFKCRLCQSSIPYRYLFLELFCG
GILLLYFYNYLDFGRTYLLFFSLCLTIFDLKNKSYPLLIWILGTLPLLCLGNHYLTFSLGISLAVLSYIKRLNIGEGDFL
YLASVSLIFPFSKILIAIELACSFGLMYFLVRKNPNETVAFVPFLFMSVLILTFM

Nucleotide


Download         Length: 648 bp        

>NTDB_id=448415 STT19_RS03710 WP_041827674.1 696847..697494(-) (cclA/cilC) [Streptococcus thermophilus strain ST19]
ATGCTTAGTATTTTATATTTTTTTCTTGGTACCTCTTTAGGCTCGTTTATTGGATTGATTTGTGATCGTTTTCCTGAGAA
GTCGATTATTTTTCCTAGAAGCCATTGCAATCAGTGTGGGCATCCGTTACGTTTTTTCGAAATGATTCCGATCCTATCAC
AACTTTTCTTAAGGTTCAAATGTCGGTTATGTCAAAGCTCTATCCCATACCGTTATCTCTTCTTGGAATTGTTTTGTGGA
GGAATACTTCTTCTTTATTTCTATAACTACCTAGATTTTGGAAGAACCTATTTGCTTTTTTTCAGTCTTTGTCTAACTAT
TTTTGATTTAAAAAATAAATCATATCCCCTTCTAATTTGGATTCTTGGAACACTACCTCTCCTATGTTTGGGAAACCACT
ACCTCACTTTTAGCTTAGGAATAAGTTTAGCCGTTCTGTCATATATCAAACGTTTAAATATTGGTGAAGGTGATTTTCTC
TATTTGGCCAGTGTCTCCCTCATTTTCCCATTTTCCAAAATACTAATAGCTATTGAACTAGCTTGCTCATTTGGGCTTAT
GTACTTCCTAGTACGTAAAAACCCTAATGAAACAGTCGCTTTTGTCCCATTTCTCTTTATGAGTGTTCTAATTCTTACCT
TCATGTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

39.72

99.535

0.395
  cclA/cilC Streptococcus pneumoniae TIGR4

39.72

99.535

0.395
  cclA/cilC Streptococcus mitis NCTC 12261

39.252

99.535

0.391
  cclA/cilC Streptococcus pneumoniae Rx1

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae D39

38.785

99.535

0.386
  cclA/cilC Streptococcus pneumoniae R6

38.785

99.535

0.386