Detailed information NTG0044697

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MARHY_RS03345
• Genome accession: NC_017067
• Coordinates: 730636..731700 (+)
• Length: 354 a.a.
• NCBI ID: WP_011784345.1
• Uniprot ID: A0A368USH3
• Organism: Marinobacter nauticus ATCC 49840
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 725636..736700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MARHY_RS03330 (MARHY0694)	rpmE	726072..726293 (+)	222	WP_014420566.1	50S ribosomal protein L31	-
MARHY_RS03335 (MARHY0695)	-	726507..727772 (+)	1266	WP_041654564.1	malic enzyme-like NAD(P)-binding protein	-
MARHY_RS03340 (MARHY0696)	-	727858..730398 (-)	2541	WP_014420568.1	penicillin-binding protein 1A	-
MARHY_RS03345 (MARHY0697)	pilM	730636..731700 (+)	1065	WP_011784345.1	pilus assembly protein PilM	Machinery gene
MARHY_RS03350 (MARHY0698)	-	731700..732263 (+)	564	WP_014420569.1	PilN domain-containing protein	-
MARHY_RS03355 (MARHY0699)	-	732263..732874 (+)	612	WP_014420570.1	type 4a pilus biogenesis protein PilO	-
MARHY_RS03360 (MARHY0700)	-	732877..733419 (+)	543	WP_023007639.1	pilus assembly protein PilP	-
MARHY_RS03365 (MARHY0701)	pilQ	733434..735548 (+)	2115	WP_014420572.1	type IV pilus secretin PilQ family protein	Machinery gene
MARHY_RS03370 (MARHY0702)	aroK	735687..736277 (+)	591	WP_014420573.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37993.03 Da
• Isoelectric Point: 4.1824

>NTDB_id=44697 MARHY_RS03345 WP_011784345.1 730636..731700(+) (pilM) [Marinobacter nauticus ATCC 49840]
MFGLPGKKSSAVLGVDVSSSSVKLLELSKHGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTSVKQVAV
AVSGSAVITKVIQMDGGLNEFEMEDQIALEADQYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEI
AGLTTKIVDVEAYALERAYSLIEPQLDSQGEELVVAIVDIGATMTTLSVLAEGKTVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYNEEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTLVANP
FANMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=44697 MARHY_RS03345 WP_011784345.1 730636..731700(+) (pilM) [Marinobacter nauticus ATCC 49840]
GTGTTCGGATTACCAGGAAAAAAATCCAGTGCCGTCCTTGGAGTGGATGTAAGCTCCAGTTCGGTCAAGCTGCTAGAGCT
GTCAAAACATGGCGATCGATACAAGGTCGAGAGCTATGCGGTAGAGCCGTTGCCGGCCAATGCAGTTGTTGAAAAAAACA
TCACAGACGTCGAAGCGGTTGGGGAAGTGCTCAAACGTGTCGCGTCCAAGTCACGTACCAGTGTGAAGCAGGTGGCTGTT
GCTGTTTCCGGCTCGGCGGTGATCACCAAGGTTATCCAGATGGACGGTGGTCTCAACGAGTTTGAAATGGAAGACCAGAT
TGCGCTGGAAGCCGATCAGTACATTCCTTACCCCCTCGATGAAGTGGCGATCGATTTCGAAGTCCAGGGCCCGTCTGAAT
CCAACCCGGATCAGGTGGATGTGCTGCTGGCGGCCTGCCGTAAGGAAAACGTCGACATCCGCGAAGATGCCCTGGAAATT
GCAGGGCTGACAACCAAGATTGTCGACGTGGAAGCCTATGCTCTGGAGCGGGCTTACAGCCTGATTGAGCCTCAGCTCGA
CTCTCAGGGAGAAGAGTTGGTGGTTGCCATCGTTGATATTGGCGCGACCATGACAACTCTGAGTGTGCTGGCAGAGGGTA
AGACGGTCTATACCCGTGAGCAGATTTTTGGCGGAAAGCAGCTGACGGAAGAAATTCAGCGTCGTTACGGATTGTCGCTC
GAAGAAGCGGGTCTGGCCAAGAAGCAGGGTGGTTTGCCAGACGACTACAACGAGGAAGTCCTGACCCCGTTCCGGGAAGC
GGTTGTTCAGCAAGTGGCGCGGGCGCTGCAGTTCTTCTTCGGCGCGAGTCAGTACAACGCGGTGGATTACGTGGTGCTTG
CCGGAGGAACAGCGTCGATTCAGGGGCTCACGGAAATGGTGGAAGAGAAAACTGGAACGCCAACCCTGGTGGCCAATCCA
TTTGCCAATATGGCGGTGGGCTCCCGGGTTAACGCCTCTGCGCTAAGCAATGATGCCCCCTCGTTGATGATTGCCTGCGG
TCTGGCAATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A368USH3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.672	100	0.537
comM	Acinetobacter nosocomialis M2	53.672	100	0.537
comM	Acinetobacter baylyi ADP1	51.695	100	0.517
pilM	Legionella pneumophila strain ERS1305867	45.198	100	0.452