Detailed information NTG0435800

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: FOB43_RS12450
• Genome accession: NZ_CP050992
• Coordinates: 2596793..2598295 (+)
• Length: 500 a.a.
• NCBI ID: WP_168227835.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_635
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2591793..2603295

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB43_RS12420 (FOB43_12420)	-	2592444..2593208 (+)	765	WP_011137553.1	cytochrome c1	-
FOB43_RS12425 (FOB43_12425)	-	2593360..2593962 (+)	603	WP_011137552.1	glutathione S-transferase N-terminal domain-containing protein	-
FOB43_RS12430 (FOB43_12430)	-	2593972..2594400 (+)	429	WP_011137551.1	ClpXP protease specificity-enhancing factor	-
FOB43_RS12435 (FOB43_12435)	-	2594516..2595826 (-)	1311	WP_168227834.1	ammonium transporter	-
FOB43_RS12440 (FOB43_12440)	glnK	2595854..2596192 (-)	339	WP_011137549.1	P-II family nitrogen regulator	-
FOB43_RS12445 (FOB43_12445)	-	2596500..2596787 (+)	288	WP_011137548.1	accessory factor UbiK family protein	-
FOB43_RS12450 (FOB43_12450)	comM	2596793..2598295 (+)	1503	WP_168227835.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
FOB43_RS12455 (FOB43_12455)	-	2598361..2599113 (+)	753	WP_168227836.1	SPOR domain-containing protein	-
FOB43_RS12460 (FOB43_12460)	-	2599145..2599756 (+)	612	WP_011137545.1	thiol:disulfide interchange protein DsbA/DsbL	-
FOB43_RS12470 (FOB43_12470)	cyoA	2600735..2601676 (+)	942	WP_011137543.1	ubiquinol oxidase subunit II	-

Sequence

Protein

• Length: 500 a.a.
• Molecular weight: 52720.43 Da
• Isoelectric Point: 7.3128

>NTDB_id=435800 FOB43_RS12450 WP_168227835.1 2596793..2598295(+) (comM) [Chromobacterium violaceum strain FDAARGOS_635]
MTLAVVASRALSGLDAPEVAVEVHLANGLPAFNIVGLPDTEVKESRDRVRAAILTSGFEFPARKITVNLAPADLPKDSGR
FDLPIAIGILLASGQVKNDDIARFEFAGELALSGAVRPVRGALAMACQCHAAGRAFVLPADSAGEAAVVGGAAVYAVESL
PQACAFLNGLQPLEPFAGAIGGEWPNYPDLADVKGQSIARGALEIAAAGGHSLLLMGPPGTGKSMLAARLPGLLPPLSET
EALESAAVQSLGSQGFQPGRWRVRPFRSPHHTASAVALVGGGSEPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLES
GMIHISRAARQASFPARFQLVAAMNPCPCGYHGHPSGRCQCTPEQVARYRGKISGPLLDRIDLQVEVPALTADELQRSAA
GEASESVRHRVLTARDRQLARQGGLNAALLGAELERHCLGDEQALAVLAKALQQLGLSARAYHRILRVSRTIADLQGAET
INRNHVLQAIQLRRVMQSGA

Nucleotide

• Length: 1503 bp

>NTDB_id=435800 FOB43_RS12450 WP_168227835.1 2596793..2598295(+) (comM) [Chromobacterium violaceum strain FDAARGOS_635]
ATGACGCTGGCGGTGGTGGCGAGCAGGGCGTTGTCCGGGCTTGACGCCCCGGAGGTGGCCGTCGAGGTCCACCTGGCCAA
CGGCCTGCCCGCGTTCAACATCGTCGGCCTGCCCGACACCGAGGTGAAGGAAAGCCGCGATCGCGTCCGCGCCGCCATTC
TCACCTCGGGCTTCGAATTTCCCGCCCGCAAGATCACCGTCAATCTCGCTCCGGCCGACCTGCCCAAGGACTCCGGTCGC
TTCGACCTGCCCATCGCCATTGGCATCCTGCTGGCGTCCGGCCAGGTGAAGAACGACGACATCGCCCGTTTCGAATTCGC
CGGCGAGCTGGCGCTCAGCGGCGCGGTGCGCCCGGTGCGCGGCGCCTTGGCGATGGCCTGCCAGTGCCACGCCGCCGGTC
GCGCTTTCGTGCTGCCTGCCGACAGCGCCGGCGAGGCGGCGGTGGTCGGCGGCGCCGCCGTCTACGCGGTGGAGTCCTTG
CCGCAGGCGTGCGCCTTTCTGAACGGTTTGCAGCCGTTGGAACCGTTCGCCGGCGCCATCGGCGGCGAGTGGCCGAACTA
TCCCGATCTGGCCGATGTCAAAGGCCAGTCCATCGCCCGCGGGGCCTTGGAAATCGCCGCGGCCGGCGGACACAGCTTGT
TGCTGATGGGGCCGCCGGGCACCGGCAAGTCCATGCTGGCGGCCAGGCTGCCCGGCCTGCTGCCGCCGTTGTCCGAAACA
GAGGCGCTGGAGAGCGCGGCGGTGCAGTCGCTGGGTTCGCAAGGCTTCCAGCCCGGCCGCTGGCGGGTGCGCCCGTTCAG
GTCGCCCCATCACACCGCTTCCGCGGTGGCGCTGGTCGGCGGCGGCAGTGAGCCGAGGCCGGGCGAGATCAGCCTGGCGC
ATCACGGCGTGCTGTTTCTCGACGAATTGCCGGAGTTCGACCGCAAGGTGCTGGAAGTGCTGCGCGAGCCGCTCGAGAGC
GGGATGATCCATATTTCGCGGGCGGCGAGGCAGGCCAGCTTCCCGGCGCGTTTCCAGCTGGTGGCGGCGATGAATCCCTG
CCCCTGCGGCTACCACGGCCATCCGTCCGGGCGCTGTCAGTGCACTCCCGAGCAGGTGGCGAGATATCGAGGTAAAATCT
CCGGCCCTTTGCTGGACCGCATCGATTTGCAGGTGGAAGTGCCGGCGCTGACCGCGGACGAGCTGCAGCGGTCCGCTGCG
GGGGAGGCCAGCGAGTCGGTGCGCCATCGGGTGCTGACGGCGCGCGATCGCCAGTTGGCGCGGCAGGGCGGGCTGAATGC
GGCATTGCTGGGCGCGGAGCTGGAGCGGCATTGCCTCGGCGACGAGCAGGCGCTGGCGGTGCTGGCCAAGGCATTGCAAC
AACTTGGCTTGTCGGCGCGCGCGTATCATCGGATACTGCGGGTTTCGCGCACCATCGCCGATTTGCAGGGCGCGGAAACG
ATAAACCGCAACCATGTATTGCAGGCGATCCAGCTCAGGCGCGTCATGCAGAGCGGCGCCTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-141)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.131	99	0.526
comM	Haemophilus influenzae Rd KW20	51.575	100	0.524
comM	Glaesserella parasuis strain SC1401	51.896	100	0.52
comM	Vibrio campbellii strain DS40M4	52.525	99	0.52
comM	Legionella pneumophila str. Paris	50.992	100	0.514
comM	Legionella pneumophila strain ERS1305867	50.992	100	0.514
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.414	100	0.466