Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   EGM181_RS11385 Genome accession   NZ_CP050485
Coordinates   2280893..2282563 (-) Length   556 a.a.
NCBI ID   WP_103299678.1    Uniprot ID   A0A2K3R058
Organism   Enterococcus gallinarum strain EGM181     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2275893..2287563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGM181_RS11360 (EGM181_11395) pstB 2276034..2276840 (-) 807 WP_003126219.1 phosphate ABC transporter ATP-binding protein PstB -
  EGM181_RS11365 (EGM181_11400) pstA 2276854..2277738 (-) 885 WP_003126218.1 phosphate ABC transporter permease PstA -
  EGM181_RS11370 (EGM181_11405) pstC 2277738..2278658 (-) 921 WP_003126217.1 phosphate ABC transporter permease subunit PstC -
  EGM181_RS11375 (EGM181_11410) - 2278777..2279631 (-) 855 WP_003126216.1 phosphate ABC transporter substrate-binding protein PstS -
  EGM181_RS11380 (EGM181_11415) - 2280042..2280770 (-) 729 WP_113849574.1 alpha/beta hydrolase -
  EGM181_RS11385 (EGM181_11420) recN 2280893..2282563 (-) 1671 WP_103299678.1 DNA repair protein RecN Machinery gene
  EGM181_RS11390 (EGM181_11425) argR 2282576..2283025 (-) 450 WP_003126212.1 arginine repressor -
  EGM181_RS11395 (EGM181_11430) - 2283119..2283949 (-) 831 WP_003126211.1 TlyA family RNA methyltransferase -
  EGM181_RS11400 (EGM181_11435) - 2283949..2284833 (-) 885 WP_175413577.1 polyprenyl synthetase family protein -
  EGM181_RS11405 (EGM181_11440) - 2284842..2285060 (-) 219 WP_003126209.1 exodeoxyribonuclease VII small subunit -
  EGM181_RS11410 (EGM181_11445) xseA 2285041..2286393 (-) 1353 WP_113849573.1 exodeoxyribonuclease VII large subunit -
  EGM181_RS11415 (EGM181_11450) - 2286395..2287246 (-) 852 WP_005471160.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 556 a.a.        Molecular weight: 62774.79 Da        Isoelectric Point: 4.4634

>NTDB_id=433266 EGM181_RS11385 WP_103299678.1 2280893..2282563(-) (recN) [Enterococcus gallinarum strain EGM181]
MLLELTIQNFAIISHLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGGRGSTDYLRQGAEKCRLEGLFEWPQQSEFQELT
EELGIDQEDVLIVQRDITQAGKTICRVNGRTVTLASLRKIGLFLVDIQGQNEHQELLQPERHLSLVDGFGDDGFKAELLH
YQDAYQEYRNLEKQVRNIQENEQLYVQRMDMLRFQQEEIAQAELIEGEEENLIEEREKLTNYQKIVDALGQSYGALSSEE
MSSVDGVSVALSEIQSIAHLDQAYEKITETIQSAYYLLQDAASDISRQLDNLELDEGRLEEVINRLETIRQLKRKYGESI
SVILAYYEEISKEISESAYTEGQLEQLEEQLTAKADAVWALAEQLHVKRREIAHRLEKEIVQELNDLYMEHAQFEVRFAN
GKQLTATGFDSVAFYLTTNPGEGMKPLVRVASGGELSRILLALKSIFSRKQGITSIVFDEVDTGVSGRVAQAIAEKISKI
ALNSQVLCITHLPQVAAVADYQYFIEKAIQEGRTETRVRQLSYEERVTEIARMLSGAEITELTVEHARELLALAHQ

Nucleotide


Download         Length: 1671 bp        

>NTDB_id=433266 EGM181_RS11385 WP_103299678.1 2280893..2282563(-) (recN) [Enterococcus gallinarum strain EGM181]
ATGCTTTTAGAGTTGACCATTCAAAATTTCGCAATTATTTCCCACTTACACCTTTCTTTTCATGAAGGAATGACAGCTTT
GACAGGTGAAACAGGTGCCGGGAAATCAATCATTATTGATGCGATGGGCTTGTTAGCCGGCGGACGCGGATCTACTGACT
ACTTGCGTCAAGGAGCAGAGAAATGCCGACTGGAAGGCCTTTTTGAATGGCCGCAGCAGTCTGAGTTTCAAGAACTGACA
GAAGAATTAGGCATTGATCAAGAAGATGTGCTGATCGTCCAACGGGATATCACACAAGCAGGAAAAACAATCTGTCGTGT
CAATGGACGTACGGTCACCTTGGCAAGTCTGCGAAAGATTGGTCTTTTTTTAGTTGATATTCAAGGACAAAACGAACATC
AAGAGTTATTACAGCCGGAAAGGCATCTTAGCTTGGTAGATGGGTTTGGCGATGATGGTTTCAAAGCAGAACTGTTGCAC
TATCAGGATGCCTATCAGGAATACCGCAATTTAGAAAAACAGGTTCGCAATATTCAGGAAAATGAACAATTATATGTTCA
ACGGATGGATATGCTGCGATTCCAACAAGAAGAAATCGCACAGGCTGAATTAATCGAGGGCGAAGAAGAAAATCTGATCG
AAGAACGTGAGAAGTTAACCAACTATCAGAAAATCGTCGATGCACTGGGGCAAAGTTATGGTGCGCTCTCTTCAGAAGAA
ATGAGCAGTGTCGACGGTGTAAGTGTGGCACTGTCCGAGATCCAATCTATCGCCCACTTAGATCAAGCCTATGAAAAAAT
CACTGAAACGATCCAGAGCGCTTATTATTTGTTGCAGGATGCTGCTTCTGATATTTCACGACAATTAGATAACCTTGAAC
TTGATGAAGGACGTCTAGAAGAAGTTATCAACCGACTGGAAACGATTCGTCAATTGAAGCGCAAATACGGCGAGTCCATC
TCCGTCATCCTAGCTTATTATGAAGAAATTAGTAAGGAGATCTCTGAATCTGCCTATACTGAAGGCCAGCTGGAACAGTT
AGAAGAGCAATTGACAGCTAAGGCCGATGCTGTTTGGGCTCTTGCTGAACAACTCCATGTCAAGCGGCGAGAAATCGCAC
ATCGATTAGAAAAAGAAATTGTGCAAGAATTGAACGACCTCTATATGGAACATGCACAGTTTGAAGTTCGCTTTGCAAAT
GGCAAGCAGTTGACAGCTACTGGATTTGATAGTGTGGCTTTTTATCTCACGACCAATCCTGGGGAAGGCATGAAGCCGTT
GGTTCGGGTAGCATCTGGTGGTGAGCTGTCTCGTATCTTATTAGCATTGAAATCGATTTTTTCACGGAAACAAGGGATCA
CGAGTATTGTTTTTGACGAAGTAGATACCGGAGTCAGTGGCCGCGTGGCGCAAGCAATTGCTGAAAAGATCTCAAAAATT
GCGTTGAATTCCCAAGTATTGTGTATCACTCATTTGCCGCAAGTAGCCGCAGTAGCTGATTATCAATATTTTATTGAAAA
AGCGATCCAAGAAGGACGGACGGAGACTCGAGTTCGTCAGTTATCCTATGAAGAACGAGTGACTGAGATTGCTCGTATGT
TATCAGGAGCAGAAATCACAGAACTGACAGTAGAGCATGCGCGTGAATTGTTAGCCTTGGCTCATCAGTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K3R058

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

47.378

100

0.487