Detailed information NTG0432292

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HBN34_RS01735
• Genome accession: NZ_CP050403
• Coordinates: 374036..375094 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain VB2486
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 369036..380094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBN34_RS01720 (HBN34_01720)	-	370142..370474 (+)	333	WP_000169601.1	hypothetical protein	-
HBN34_RS01725 (HBN34_01725)	-	370477..371301 (+)	825	WP_086245490.1	putative RNA methyltransferase	-
HBN34_RS01730 (HBN34_01730)	ponA	371319..373874 (-)	2556	WP_000736663.1	penicillin-binding protein PBP1a	-
HBN34_RS01735 (HBN34_01735)	pilM	374036..375094 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
HBN34_RS01740 (HBN34_01740)	pilN	375094..375735 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
HBN34_RS01745 (HBN34_01745)	pilO	375732..376472 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
HBN34_RS01750 (HBN34_01750)	pilP	376483..377010 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
HBN34_RS01755 (HBN34_01755)	pilQ	377073..379238 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
HBN34_RS01760 (HBN34_01760)	aroK	379250..379819 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=432292 HBN34_RS01735 WP_002014066.1 374036..375094(+) (pilM) [Acinetobacter baumannii strain VB2486]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=432292 HBN34_RS01735 WP_002014066.1 374036..375094(+) (pilM) [Acinetobacter baumannii strain VB2486]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423