Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | HBA50_RS00900 | Genome accession | NZ_CP050133 |
| Coordinates | 170884..171849 (+) | Length | 321 a.a. |
| NCBI ID | WP_045500301.1 | Uniprot ID | - |
| Organism | Streptococcus cristatus ATCC 51100 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 165884..176849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA50_RS00860 (HBA50_00860) | - | 166674..167045 (+) | 372 | WP_045500282.1 | DUF1033 family protein | - |
| HBA50_RS00865 (HBA50_00865) | comYA | 167131..168072 (+) | 942 | WP_045500284.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HBA50_RS00870 (HBA50_00870) | comYB | 168020..169036 (+) | 1017 | WP_045500287.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HBA50_RS00875 (HBA50_00875) | comYC | 169033..169350 (+) | 318 | WP_045500288.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HBA50_RS00880 (HBA50_00880) | comYD | 169310..169744 (+) | 435 | WP_045500291.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HBA50_RS00885 (HBA50_00885) | comGE | 169710..170003 (+) | 294 | WP_200893262.1 | competence type IV pilus minor pilin ComGE | - |
| HBA50_RS00890 (HBA50_00890) | comGF/cglF | 169987..170424 (+) | 438 | WP_045500297.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HBA50_RS00895 (HBA50_00895) | comGG | 170405..170803 (+) | 399 | WP_045500299.1 | competence type IV pilus minor pilin ComGG | - |
| HBA50_RS00900 (HBA50_00900) | comYH | 170884..171849 (+) | 966 | WP_045500301.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HBA50_RS00905 (HBA50_00905) | - | 171885..173078 (+) | 1194 | WP_045500304.1 | acetate kinase | - |
| HBA50_RS00910 (HBA50_00910) | - | 173389..174279 (-) | 891 | WP_045500311.1 | RluA family pseudouridine synthase | - |
| HBA50_RS00915 (HBA50_00915) | pbp2a | 174431..176653 (+) | 2223 | WP_045500313.1 | penicillin-binding protein PBP2A | - |
Sequence
Protein
Download Length: 321 a.a. Molecular weight: 36668.81 Da Isoelectric Point: 4.9744
>NTDB_id=430190 HBA50_RS00900 WP_045500301.1 170884..171849(+) (comYH) [Streptococcus cristatus ATCC 51100]
MKFEKIERAFHLLLENVQNIQNVLGTNFYDALIEQNGIYLDGDTDLQEILKNNDKLRALHLTKEEWRRAYQFIFMKASQT
EPLQANHQFTPDSVGFLLSFLIDQLARDERVDLLEIGSGTGNLAETLLNHTQKNMDYLGLEIDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDLIVSDLPVGYYPDDAVAARYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNNLLTSPQ
SHLLKKWLLSSAQLLAMISLPEKIFASRQNAKTIFVLRKQGESVIQPFIYPLQDLQSQDEILKFRESFQNWVKVSEIRTN
F
MKFEKIERAFHLLLENVQNIQNVLGTNFYDALIEQNGIYLDGDTDLQEILKNNDKLRALHLTKEEWRRAYQFIFMKASQT
EPLQANHQFTPDSVGFLLSFLIDQLARDERVDLLEIGSGTGNLAETLLNHTQKNMDYLGLEIDDLLIDLSASIAEVMNSK
AHFAQGDAVRPQVLKESDLIVSDLPVGYYPDDAVAARYEVASPDEHTYAHHLLMEQSLKYLKPGGYAIFLAPNNLLTSPQ
SHLLKKWLLSSAQLLAMISLPEKIFASRQNAKTIFVLRKQGESVIQPFIYPLQDLQSQDEILKFRESFQNWVKVSEIRTN
F
Nucleotide
Download Length: 966 bp
>NTDB_id=430190 HBA50_RS00900 WP_045500301.1 170884..171849(+) (comYH) [Streptococcus cristatus ATCC 51100]
ATGAAATTTGAAAAAATAGAACGAGCTTTTCATCTACTTTTAGAAAACGTGCAAAATATCCAAAATGTGCTGGGGACAAA
TTTCTATGATGCCTTGATTGAGCAGAATGGGATTTATCTGGACGGAGATACAGACTTACAAGAAATTCTGAAAAACAATG
ACAAGCTTCGTGCCTTGCATTTGACCAAGGAGGAGTGGCGTCGGGCTTATCAGTTTATTTTTATGAAGGCTTCTCAGACA
GAGCCACTCCAAGCTAATCACCAGTTCACACCGGATTCGGTCGGCTTTTTGCTGAGTTTTTTGATTGACCAGTTGGCCCG
AGACGAGAGAGTTGATTTGCTAGAGATCGGTAGTGGGACAGGCAATTTGGCGGAGACTCTGCTCAACCACACGCAAAAGA
ATATGGATTATCTGGGCCTAGAAATTGACGATTTGCTGATTGATTTGTCTGCCAGCATTGCCGAAGTTATGAATTCTAAG
GCACACTTTGCTCAAGGAGATGCGGTGCGGCCTCAGGTTCTGAAAGAAAGCGACTTGATTGTCAGTGATTTGCCAGTGGG
CTATTATCCAGATGATGCCGTGGCAGCTCGTTATGAGGTTGCCAGTCCAGACGAGCATACTTACGCCCATCATCTCTTGA
TGGAGCAATCGCTAAAATATTTGAAGCCGGGAGGCTATGCTATCTTTCTCGCACCAAATAATCTGCTGACGAGTCCTCAA
AGTCACCTGCTTAAAAAATGGCTACTGTCTAGCGCTCAGCTTTTGGCAATGATTTCCCTGCCAGAGAAGATTTTCGCGAG
CCGACAGAATGCTAAGACGATATTTGTCCTGAGAAAACAAGGCGAATCAGTCATCCAGCCGTTTATCTACCCTTTGCAGG
ACTTGCAAAGTCAGGATGAAATCTTAAAGTTTCGTGAAAGTTTTCAAAACTGGGTCAAAGTTAGTGAAATTCGAACAAAT
TTCTGA
ATGAAATTTGAAAAAATAGAACGAGCTTTTCATCTACTTTTAGAAAACGTGCAAAATATCCAAAATGTGCTGGGGACAAA
TTTCTATGATGCCTTGATTGAGCAGAATGGGATTTATCTGGACGGAGATACAGACTTACAAGAAATTCTGAAAAACAATG
ACAAGCTTCGTGCCTTGCATTTGACCAAGGAGGAGTGGCGTCGGGCTTATCAGTTTATTTTTATGAAGGCTTCTCAGACA
GAGCCACTCCAAGCTAATCACCAGTTCACACCGGATTCGGTCGGCTTTTTGCTGAGTTTTTTGATTGACCAGTTGGCCCG
AGACGAGAGAGTTGATTTGCTAGAGATCGGTAGTGGGACAGGCAATTTGGCGGAGACTCTGCTCAACCACACGCAAAAGA
ATATGGATTATCTGGGCCTAGAAATTGACGATTTGCTGATTGATTTGTCTGCCAGCATTGCCGAAGTTATGAATTCTAAG
GCACACTTTGCTCAAGGAGATGCGGTGCGGCCTCAGGTTCTGAAAGAAAGCGACTTGATTGTCAGTGATTTGCCAGTGGG
CTATTATCCAGATGATGCCGTGGCAGCTCGTTATGAGGTTGCCAGTCCAGACGAGCATACTTACGCCCATCATCTCTTGA
TGGAGCAATCGCTAAAATATTTGAAGCCGGGAGGCTATGCTATCTTTCTCGCACCAAATAATCTGCTGACGAGTCCTCAA
AGTCACCTGCTTAAAAAATGGCTACTGTCTAGCGCTCAGCTTTTGGCAATGATTTCCCTGCCAGAGAAGATTTTCGCGAG
CCGACAGAATGCTAAGACGATATTTGTCCTGAGAAAACAAGGCGAATCAGTCATCCAGCCGTTTATCTACCCTTTGCAGG
ACTTGCAAAGTCAGGATGAAATCTTAAAGTTTCGTGAAAGTTTTCAAAACTGGGTCAAAGTTAGTGAAATTCGAACAAAT
TTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
59.164 |
96.885 |
0.573 |
| comYH | Streptococcus mutans UA140 |
59.164 |
96.885 |
0.573 |