Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HBA50_RS00020 Genome accession   NZ_CP050133
Coordinates   3125..3886 (-) Length   253 a.a.
NCBI ID   WP_045499887.1    Uniprot ID   -
Organism   Streptococcus cristatus ATCC 51100     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..8886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS00010 (HBA50_00010) dnaN 263..1399 (-) 1137 WP_045499880.1 DNA polymerase III subunit beta -
  HBA50_RS00015 (HBA50_00015) dnaA 1557..2912 (-) 1356 WP_045499883.1 chromosomal replication initiator protein DnaA -
  HBA50_RS00020 (HBA50_00020) spo0J 3125..3886 (-) 762 WP_045499887.1 ParB/RepB/Spo0J family partition protein Regulator
  HBA50_RS00025 (HBA50_00025) htrA 3949..5127 (-) 1179 WP_045499890.1 S1C family serine protease Regulator
  HBA50_RS00030 (HBA50_00030) rlmH 5330..5809 (+) 480 WP_045499893.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HBA50_RS00040 (HBA50_00040) comC 6103..6228 (+) 126 WP_045499896.1 ComC/BlpC family leader-containing pheromone/bacteriocin Regulator
  HBA50_RS00045 (HBA50_00045) comD/comD2 6251..7576 (+) 1326 WP_045499899.1 GHKL domain-containing protein Regulator
  HBA50_RS00050 (HBA50_00050) comE/comE2 7573..8316 (+) 744 WP_045499902.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29534.23 Da        Isoelectric Point: 9.5711

>NTDB_id=430179 HBA50_RS00020 WP_045499887.1 3125..3886(-) (spo0J) [Streptococcus cristatus ATCC 51100]
MENYQYIPLKDIRTNPYQPRKNFSQEKINELAASIKENGIIQPIILRRSSLFGYEILAGERRFRAAKIAGLENIPALIKD
LSDDDMMKQAIIENLQREDLNPIEEAESYQHLIEKGLTHEEIARIMGKSRPYISNLVRLLQLPDFMLDAVKEEMISQGHA
RLLIPLKKEEQIFWLDRIIQDNLSVRALELSLQKKKKSKNRKNKEIFSHSEEERLKKILGLNVSIQLKNSSKGKIVIPFE
NEEEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=430179 HBA50_RS00020 WP_045499887.1 3125..3886(-) (spo0J) [Streptococcus cristatus ATCC 51100]
ATGGAAAATTATCAATACATACCACTAAAAGACATTCGAACAAATCCTTATCAACCTAGAAAAAACTTTTCTCAAGAGAA
AATAAATGAATTGGCAGCTTCTATTAAAGAAAATGGAATTATCCAGCCCATTATTTTGAGAAGATCTTCCTTATTTGGTT
ACGAAATTTTAGCAGGTGAAAGACGATTCAGAGCTGCTAAGATTGCTGGCTTAGAAAACATTCCTGCCCTTATTAAAGAC
CTATCTGACGATGACATGATGAAGCAGGCCATCATCGAGAATTTGCAAAGGGAGGACCTCAATCCGATCGAAGAAGCGGA
ATCCTATCAGCATCTGATTGAGAAAGGTCTGACCCATGAAGAAATTGCAAGAATTATGGGAAAATCTCGGCCTTACATCA
GTAATCTTGTCCGCTTGTTACAGCTACCAGATTTTATGCTGGACGCTGTCAAAGAGGAAATGATTTCGCAAGGGCATGCT
CGTCTCCTCATCCCACTAAAAAAGGAAGAGCAAATTTTTTGGCTGGACAGAATCATTCAAGATAATTTATCCGTTCGTGC
TCTTGAACTTTCATTACAAAAGAAAAAAAAGTCAAAGAACAGAAAGAACAAAGAAATTTTCTCCCATTCGGAAGAAGAAA
GATTGAAAAAAATCCTTGGACTCAATGTCTCCATTCAATTAAAAAATTCTTCAAAAGGAAAGATCGTTATTCCTTTTGAA
AACGAGGAAGAGTATCAAAGAATTATAAACAGCCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-189)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.506