Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | G9P47_RS07130 | Genome accession | NZ_CP049802 |
| Coordinates | 1439522..1439839 (+) | Length | 105 a.a. |
| NCBI ID | WP_002465742.1 | Uniprot ID | - |
| Organism | Staphylococcus warneri strain Cap 100.1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1434522..1444839
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9P47_RS07100 (G9P47_07120) | - | 1435313..1435516 (+) | 204 | WP_002451885.1 | YqgQ family protein | - |
| G9P47_RS07105 (G9P47_07125) | - | 1435513..1436499 (+) | 987 | WP_002465775.1 | ROK family glucokinase | - |
| G9P47_RS07110 (G9P47_07130) | - | 1436499..1436822 (+) | 324 | WP_015364969.1 | MTH1187 family thiamine-binding protein | - |
| G9P47_RS07115 (G9P47_07135) | - | 1436826..1437449 (+) | 624 | WP_002465751.1 | MBL fold metallo-hydrolase | - |
| G9P47_RS07120 (G9P47_07140) | comGA | 1437496..1438470 (+) | 975 | WP_002465784.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| G9P47_RS07125 (G9P47_07145) | comGB | 1438442..1439509 (+) | 1068 | WP_002465743.1 | competence type IV pilus assembly protein ComGB | - |
| G9P47_RS07130 (G9P47_07150) | comGC | 1439522..1439839 (+) | 318 | WP_002465742.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| G9P47_RS12200 | comGD | 1439817..1440257 (+) | 441 | WP_015364970.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| G9P47_RS07135 (G9P47_07155) | - | 1440455..1440952 (+) | 498 | WP_002465737.1 | competence type IV pilus minor pilin ComGF | - |
| G9P47_RS07140 (G9P47_07160) | - | 1441111..1441629 (+) | 519 | WP_037539765.1 | shikimate kinase | - |
| G9P47_RS07145 (G9P47_07165) | gcvT | 1441801..1442892 (+) | 1092 | WP_002465750.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| G9P47_RS07150 (G9P47_07170) | gcvPA | 1442911..1444260 (+) | 1350 | WP_235065678.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11738.79 Da Isoelectric Point: 9.5430
>NTDB_id=427948 G9P47_RS07130 WP_002465742.1 1439522..1439839(+) (comGC) [Staphylococcus warneri strain Cap 100.1]
MRKHKYSLKTKAFTLIEMLLVLLIISLLLILIIPNVAKQTAHIQSTGCDAQVKMINSQIEAYTLKHNRNPNTIQDLITEG
YIKENQKSCKTGETISISNGEAIAN
MRKHKYSLKTKAFTLIEMLLVLLIISLLLILIIPNVAKQTAHIQSTGCDAQVKMINSQIEAYTLKHNRNPNTIQDLITEG
YIKENQKSCKTGETISISNGEAIAN
Nucleotide
Download Length: 318 bp
>NTDB_id=427948 G9P47_RS07130 WP_002465742.1 1439522..1439839(+) (comGC) [Staphylococcus warneri strain Cap 100.1]
ATGAGAAAACATAAATACTCACTTAAAACTAAAGCTTTCACCTTAATAGAAATGCTTTTAGTATTATTAATCATAAGTTT
ATTACTTATTTTAATTATACCTAATGTCGCCAAACAGACGGCACATATTCAATCAACTGGCTGCGATGCACAAGTTAAAA
TGATAAATAGCCAAATTGAAGCGTATACTTTAAAACATAATAGAAATCCAAATACTATTCAGGATTTAATTACAGAAGGA
TATATTAAAGAGAATCAAAAAAGTTGTAAAACAGGTGAAACAATTTCAATAAGTAATGGCGAAGCGATTGCAAATTAA
ATGAGAAAACATAAATACTCACTTAAAACTAAAGCTTTCACCTTAATAGAAATGCTTTTAGTATTATTAATCATAAGTTT
ATTACTTATTTTAATTATACCTAATGTCGCCAAACAGACGGCACATATTCAATCAACTGGCTGCGATGCACAAGTTAAAA
TGATAAATAGCCAAATTGAAGCGTATACTTTAAAACATAATAGAAATCCAAATACTATTCAGGATTTAATTACAGAAGGA
TATATTAAAGAGAATCAAAAAAGTTGTAAAACAGGTGAAACAATTTCAATAAGTAATGGCGAAGCGATTGCAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
81.188 |
96.19 |
0.781 |
| comGC | Staphylococcus aureus N315 |
81.188 |
96.19 |
0.781 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
43.434 |
94.286 |
0.41 |
| comYC | Streptococcus suis isolate S10 |
50 |
76.19 |
0.381 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
42.553 |
89.524 |
0.381 |