Detailed information NTG0424633

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: G5C59_RS08825
• Genome accession: NZ_CP049088
• Coordinates: 1774043..1775170 (-)
• Length: 375 a.a.
• NCBI ID: WP_164681760.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain sHPS7
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1769043..1780170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G5C59_RS08810 (G5C59_08770)	-	1771380..1772168 (-)	789	WP_160421903.1	heme ABC transporter ATP-binding protein	-
G5C59_RS08815 (G5C59_08775)	-	1772168..1773154 (-)	987	WP_164681759.1	FecCD family ABC transporter permease	-
G5C59_RS08820 (G5C59_08780)	-	1773154..1773990 (-)	837	WP_010787337.1	heme/hemin ABC transporter substrate-binding protein	-
G5C59_RS08825 (G5C59_08785)	dprA	1774043..1775170 (-)	1128	WP_164681760.1	DNA-processing protein DprA	Machinery gene
G5C59_RS08830 (G5C59_08790)	-	1775195..1776013 (-)	819	WP_075630737.1	Bro-N domain-containing protein	-
G5C59_RS08835 (G5C59_08795)	def	1776231..1776743 (+)	513	WP_005712670.1	peptide deformylase	-
G5C59_RS08840 (G5C59_08800)	rfaD	1776755..1777681 (+)	927	WP_035525215.1	ADP-glyceromanno-heptose 6-epimerase	-
G5C59_RS08845 (G5C59_08805)	-	1777773..1778714 (+)	942	WP_021111453.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41808.86 Da
• Isoelectric Point: 5.6029

>NTDB_id=424633 G5C59_RS08825 WP_164681760.1 1774043..1775170(-) (dprA) [Glaesserella parasuis strain sHPS7]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNAVQNPYSEGCHKLIKEGALLVENIDDILEAIAWQRQSVHIQPSLFDTKPKQAVKSEPKFAKNLPEL
TACQQQLFEQISLEPISVDDLAKATDMAVETALIELLNLELLGVVKQVRGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=424633 G5C59_RS08825 WP_164681760.1 1774043..1775170(-) (dprA) [Glaesserella parasuis strain sHPS7]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATACGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATTGATCAGGCGTTACAATGGGCAGAACAGGATCAGCAACGGATTTTAACCTTATTT
GACGAAGATTATCCTTTTTTATTGAAGCAGATCAGTACTGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTATTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAACTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGTCAAT
GAAAACGGAATTACCATTGCGGTTCTAGGCAGTGGGCTAGACCAAGTCTATCCTGCCCGCCACAAAAAACTTGCGGAACA
AATCGTTGATACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAAAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCGCTAGGAACATTGGTTATTGAAGCAACAGTGAATAGTGGCTCGCTCATTACTGCCCGT
TATGCGTTAGAGCAAGGGCGAGAAGTCTTTGCATTGCCGAACGCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTACTGGTTGAAAATATTGACGACATTTTAGAAGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGAACCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCGTTGATGATCTTGCCAAAGCAACAGATAT
GGCGGTAGAAACCGCATTAATTGAGCTGTTAAATTTGGAGTTGTTGGGTGTTGTGAAGCAGGTGAGAGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	98.4	100	0.984
dprA	Haemophilus influenzae Rd KW20	52.941	90.667	0.48
dprA	Vibrio campbellii strain DS40M4	46.649	99.467	0.464
dprA	Vibrio cholerae strain A1552	43.617	100	0.437
dprA	Legionella pneumophila strain ERS1305867	38.624	100	0.389
dprA	Neisseria gonorrhoeae MS11	42.994	83.733	0.36