Detailed information NTG0423395

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: G4G71_RS05465
• Genome accession: NZ_CP048833
• Coordinates: 1194837..1195901 (+)
• Length: 354 a.a.
• NCBI ID: WP_024764148.1
• Uniprot ID: A0A1B8VEU1
• Organism: Pseudomonas multiresinivorans strain populi
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1189837..1200901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G71_RS05445 (G4G71_05440)	-	1190270..1191040 (+)	771	WP_169935933.1	class I SAM-dependent methyltransferase	-
G4G71_RS05450 (G4G71_05445)	-	1191090..1191584 (+)	495	WP_169935935.1	YgjP-like metallopeptidase domain-containing protein	-
G4G71_RS05455 (G4G71_05450)	-	1191578..1192045 (-)	468	WP_169935937.1	hypothetical protein	-
G4G71_RS05460 (G4G71_05455)	-	1192222..1194651 (-)	2430	WP_169935939.1	penicillin-binding protein 1A	-
G4G71_RS05465 (G4G71_05460)	comM	1194837..1195901 (+)	1065	WP_024764148.1	pilus assembly protein PilM	Machinery gene
G4G71_RS05470 (G4G71_05465)	pilN	1195901..1196494 (+)	594	WP_169935941.1	type 4a pilus biogenesis protein PilN	-
G4G71_RS05475 (G4G71_05470)	pilO	1196491..1197141 (+)	651	WP_169935943.1	type 4a pilus biogenesis protein PilO	-
G4G71_RS05480 (G4G71_05475)	pilP	1197138..1197662 (+)	525	WP_169935945.1	type 4a pilus biogenesis lipoprotein PilP	-
G4G71_RS05485 (G4G71_05480)	pilQ	1197716..1199857 (+)	2142	WP_169942523.1	type IV pilus secretin PilQ	Machinery gene
G4G71_RS05490 (G4G71_05485)	aroK	1199893..1200384 (+)	492	WP_052239087.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37761.04 Da
• Isoelectric Point: 4.4486

>NTDB_id=423395 G4G71_RS05465 WP_024764148.1 1194837..1195901(+) (comM) [Pseudomonas multiresinivorans strain populi]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIAELEGVGQALSRVVAKARTAVKTSAV
AVAGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGTSARNAERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFSLLGDQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMVLSGKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=423395 G4G71_RS05465 WP_024764148.1 1194837..1195901(+) (comM) [Pseudomonas multiresinivorans strain populi]
GTGCTAGGGCTCTTCAATAAGAAAGCGAACACGCTGCTGGGGATAGACATCAGTTCGACTTCGGTCAAACTTCTCGAATT
GAGCCGCTCTGGAGGCCGCTACAAGGTAGAGGCCTACGCTGTCGAGCCGCTCCCGCCCAATGCAGTGGTAGAAAAGAACA
TCGCTGAGCTGGAGGGTGTCGGCCAGGCGTTGTCACGTGTGGTCGCCAAGGCGCGGACCGCTGTGAAAACGTCTGCGGTC
GCGGTTGCCGGCTCGGCGGTCATCACCAAAACCATCGAGATGGACGGCGGACTCTCGGACGACGAGCTGGAGAATCAGCT
CAAGATCGAGGCCGACCAGTACATCCCCTATCCCCTCGAAGAGGTCGCGATCGACTTCGAGGTGCAAGGCACGTCTGCGC
GCAACGCAGAGCGCGTCGATGTTCTTCTTGCTGCTTGCCGCAAGGAAAACGTCGAGGTGCGCGAAGCTGCGCTGGCGCTC
GCGGGTCTGACGGCCAAGGTCGTCGACGTCGAAGCCTATGCGCTGGAGCGAGCATTCAGTCTGCTGGGAGACCAGCTGGG
CGGCAATGCCGACGAGCTCACAGTTGCGGTGGTGGATATCGGCGCCACCATGACCACGCTGAGCGTCCTGCACCACGGTC
GCACTATCTATACGCGCGAACAGCTCTTCGGTGGGCGCCAGTTGACCGAGGAAATCCAGCGTCGCTATGGCCTGTCGGTC
GAGGAAGCGGGCCTTGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTGCTGCAACCGTTCAAGGATGC
CGTGGTCCAGCAGGTGTCCCGTTCCTTGCAGTTCTTCTTCGCCGCCGGTCAGTTCAACGATGTGGATTACATCCTGCTGG
CGGGTGGCACTGCGTCCATCCCTGACCTGGATCGCCTGATCCAGCAGAAGATCGGTACTCCGACCCTGGTGGCCAACCCG
TTCGCCGACATGGTGCTGAGCGGCAAGGTCAACGCCGGTGCGCTGGCCAGTGATGCGCCCGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A1B8VEU1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	57.345	100	0.573
pilM	Acinetobacter baumannii D1279779	57.345	100	0.573
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466