Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   G3T43_RS06360 Genome accession   NZ_CP048767
Coordinates   1233332..1233847 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain ZJB021     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1228332..1238847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T43_RS06345 (G3T43_06350) - 1228442..1230259 (-) 1818 WP_167861776.1 motility associated factor glycosyltransferase family protein -
  G3T43_RS06350 (G3T43_06355) - 1230256..1232079 (-) 1824 WP_167861777.1 motility associated factor glycosyltransferase family protein -
  G3T43_RS06355 (G3T43_06360) - 1232089..1233332 (-) 1244 Protein_1243 DUF2920 family protein -
  G3T43_RS06360 (G3T43_06365) ctsG 1233332..1233847 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  G3T43_RS06365 (G3T43_06370) tsaD 1233848..1234855 (-) 1008 WP_167861778.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  G3T43_RS06370 (G3T43_06375) - 1234852..1236245 (-) 1394 Protein_1246 M99 family carboxypeptidase catalytic domain-containing protein -
  G3T43_RS06375 (G3T43_06380) dxr 1236247..1237317 (-) 1071 WP_002867315.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  G3T43_RS06380 (G3T43_06385) cdsA 1237314..1238039 (-) 726 WP_002867314.1 phosphatidate cytidylyltransferase -
  G3T43_RS06385 (G3T43_06390) - 1238048..1238386 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=422813 G3T43_RS06360 WP_002799196.1 1233332..1233847(-) (ctsG) [Campylobacter jejuni strain ZJB021]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=422813 G3T43_RS06360 WP_002799196.1 1233332..1233847(-) (ctsG) [Campylobacter jejuni strain ZJB021]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment