Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   G3T43_RS06690 Genome accession   NZ_CP048767
Coordinates   1301202..1302386 (-) Length   394 a.a.
NCBI ID   WP_167861802.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZJB021     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1296202..1307386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T43_RS06665 (G3T43_06670) fliL 1297347..1297883 (+) 537 WP_052817805.1 flagellar basal body-associated protein FliL -
  G3T43_RS06670 (G3T43_06675) acpS 1297883..1298230 (+) 348 WP_167861800.1 holo-ACP synthase -
  G3T43_RS06675 (G3T43_06680) - 1298231..1298650 (-) 420 WP_167861801.1 hypothetical protein -
  G3T43_RS06680 (G3T43_06685) - 1298647..1300017 (-) 1371 WP_038835074.1 cytochrome P450 -
  G3T43_RS06685 (G3T43_06690) - 1300014..1301135 (-) 1122 WP_002814384.1 hypothetical protein -
  G3T43_RS06690 (G3T43_06695) kpsS 1301202..1302386 (-) 1185 WP_167861802.1 capsule biosynthesis protein Regulator
  G3T43_RS06695 (G3T43_06700) - 1302383..1304410 (-) 2028 WP_167861803.1 capsular polysaccharide biosynthesis protein -
  G3T43_RS06700 (G3T43_06705) - 1304442..1306133 (-) 1692 WP_167861804.1 hypothetical protein -
  G3T43_RS06705 (G3T43_06710) cysC 1306130..1306714 (-) 585 WP_167861805.1 adenylyl-sulfate kinase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46696.43 Da        Isoelectric Point: 9.9892

>NTDB_id=422816 G3T43_RS06690 WP_167861802.1 1301202..1302386(-) (kpsS) [Campylobacter jejuni strain ZJB021]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYENFFKEKKI
DAIVMYNDCRLIHAKAIKVAKELGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSAFLYWFFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAVLQVYSDTQIKYH
YKKSIEDFIEELILSFANHARTKSYLVFKHHPMDRGYRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPNLVLNFKNYLLNTNQFNGNFYKNSFLSR

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=422816 G3T43_RS06690 WP_167861802.1 1301202..1302386(-) (kpsS) [Campylobacter jejuni strain ZJB021]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGCACTTTTTT
TCACCGCCTTGCTATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGCGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTCTATGAGAACTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGTCGTTTGATTCATGCAAAAGCTATCAAAGTAGCTAAGGAGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGCTTTAAATTT
ATGGCCTTTAGTGCTTTTTTGTATTGGTTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CCTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTACAGCCTTGAAAAAAAGTATTTTTTGGCTGTTTTGCAAGTTTATAGCGATACACAGATTAAGTATCAT
TATAAAAAAAGTATAGAAGATTTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAACAAAGTCTTATCTTGT
CTTTAAACATCATCCTATGGACAGGGGATATAGAAATTATTCTAAACTGATAAATGAGCTAAGCCAAAAATACCATGTAG
AAGGAAGAATTTTATATGTGCACGATACTTATTTACCCACTCTTTTAAAAAAGGCTTTGGGTTGCATCACGATTAATTCT
ACAGTGGGTTTAAGTGCTATTTTGGAGGGCTGTCCTACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCTAAAAAACTCCAATTTTTTTGGCGCGAAGCTCATGCTTACAAACCCAATCCTAATTTGGTTTTAAATTTCAAAA
ACTATCTTTTAAATACAAATCAATTCAACGGCAATTTTTACAAAAATTCTTTTTTAAGTCGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

87.817

100

0.878


Multiple sequence alignment