Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | G0030_RS01325 | Genome accession | NZ_CP048681 |
| Coordinates | 282661..283188 (+) | Length | 175 a.a. |
| NCBI ID | WP_104489345.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain Q186-3_T | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 277661..288188
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0030_RS01310 (G0030_01310) | pilM | 280252..281310 (+) | 1059 | WP_016658445.1 | pilus assembly protein PilM | Machinery gene |
| G0030_RS01315 (G0030_01315) | pilN | 281310..281945 (+) | 636 | WP_180182073.1 | PilN domain-containing protein | Machinery gene |
| G0030_RS01320 (G0030_01320) | pilO | 281942..282661 (+) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| G0030_RS01325 (G0030_01325) | pilP | 282661..283188 (+) | 528 | WP_104489345.1 | pilus assembly protein PilP | Machinery gene |
| G0030_RS01330 (G0030_01330) | pilQ | 283249..285387 (+) | 2139 | WP_180182089.1 | type IV pilus secretin PilQ | Machinery gene |
| G0030_RS01335 (G0030_01335) | aroK | 285424..285966 (+) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| G0030_RS01340 (G0030_01340) | aroB | 285989..287071 (+) | 1083 | WP_180182072.1 | 3-dehydroquinate synthase | - |
| G0030_RS01345 (G0030_01345) | - | 287084..287920 (+) | 837 | WP_104472445.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19272.46 Da Isoelectric Point: 7.1666
>NTDB_id=422224 G0030_RS01325 WP_104489345.1 282661..283188(+) (pilP) [Acinetobacter indicus strain Q186-3_T]
MKFEKLSLVLVLGLLAAGCDSRIDAVNTQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKFEKLSLVLVLGLLAAGCDSRIDAVNTQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=422224 G0030_RS01325 WP_104489345.1 282661..283188(+) (pilP) [Acinetobacter indicus strain Q186-3_T]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TACACAAATGGCAGAAATCCGTAATCAGCCGCCGTTGCCGATTGAGCCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCGCATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGTATGAAAGGTAGCATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGTGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TACACAAATGGCAGAAATCCGTAATCAGCCGCCGTTGCCGATTGAGCCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCGCATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGTATGAAAGGTAGCATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGTGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
75.429 |
100 |
0.754 |
| comL | Acinetobacter baylyi ADP1 |
71.856 |
95.429 |
0.686 |