Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | G0030_RS01315 | Genome accession | NZ_CP048681 |
| Coordinates | 281310..281945 (+) | Length | 211 a.a. |
| NCBI ID | WP_180182073.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain Q186-3_T | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 276310..286945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0030_RS01300 (G0030_01300) | - | 276658..277461 (+) | 804 | WP_180182075.1 | putative RNA methyltransferase | - |
| G0030_RS01305 (G0030_01305) | ponA | 277504..280080 (-) | 2577 | WP_180182074.1 | penicillin-binding protein PBP1a | - |
| G0030_RS01310 (G0030_01310) | pilM | 280252..281310 (+) | 1059 | WP_016658445.1 | pilus assembly protein PilM | Machinery gene |
| G0030_RS01315 (G0030_01315) | pilN | 281310..281945 (+) | 636 | WP_180182073.1 | PilN domain-containing protein | Machinery gene |
| G0030_RS01320 (G0030_01320) | pilO | 281942..282661 (+) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| G0030_RS01325 (G0030_01325) | pilP | 282661..283188 (+) | 528 | WP_104489345.1 | pilus assembly protein PilP | Machinery gene |
| G0030_RS01330 (G0030_01330) | pilQ | 283249..285387 (+) | 2139 | WP_180182089.1 | type IV pilus secretin PilQ | Machinery gene |
| G0030_RS01335 (G0030_01335) | aroK | 285424..285966 (+) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23466.87 Da Isoelectric Point: 7.9757
>NTDB_id=422222 G0030_RS01315 WP_180182073.1 281310..281945(+) (pilN) [Acinetobacter indicus strain Q186-3_T]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKAARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKAARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=422222 G0030_RS01315 WP_180182073.1 281310..281945(+) (pilN) [Acinetobacter indicus strain Q186-3_T]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGCGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGCGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |