Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | G3M63_RS19305 | Genome accession | NZ_CP048629 |
| Coordinates | 4202480..4203826 (+) | Length | 448 a.a. |
| NCBI ID | WP_150299557.1 | Uniprot ID | A0A6C0TW81 |
| Organism | Pseudomonas sp. OIL-1 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4197480..4208826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3M63_RS19285 (G3M63_19285) | rluD | 4198193..4199152 (-) | 960 | WP_163984128.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| G3M63_RS19290 (G3M63_19290) | - | 4199350..4200345 (+) | 996 | WP_150299560.1 | outer membrane protein assembly factor BamD | - |
| G3M63_RS19295 (G3M63_19295) | - | 4200565..4200801 (+) | 237 | WP_163984129.1 | PP0621 family protein | - |
| G3M63_RS19300 (G3M63_19300) | pilS | 4200853..4202427 (+) | 1575 | WP_150299558.1 | PAS domain-containing sensor histidine kinase | Regulator |
| G3M63_RS19305 (G3M63_19305) | pilR | 4202480..4203826 (+) | 1347 | WP_150299557.1 | sigma-54 dependent transcriptional regulator | Regulator |
| G3M63_RS19310 (G3M63_19310) | thiO | 4203830..4204933 (-) | 1104 | WP_150299556.1 | glycine oxidase ThiO | - |
| G3M63_RS19315 (G3M63_19315) | mqo | 4205135..4206637 (+) | 1503 | WP_150299555.1 | malate dehydrogenase (quinone) | - |
| G3M63_RS19320 (G3M63_19320) | - | 4206613..4207674 (-) | 1062 | WP_163984130.1 | M48 family metallopeptidase | - |
Sequence
Protein
Download Length: 448 a.a. Molecular weight: 49637.25 Da Isoelectric Point: 5.3942
>NTDB_id=421984 G3M63_RS19305 WP_150299557.1 4202480..4203826(+) (pilR) [Pseudomonas sp. OIL-1]
MNNPLVLIIDDEPDILELLDMTLKRMEVRTRSATTLTQALDLLAEHSFDLCLTDMRLPDGDGMSVVRYIQQHAPDTPVAM
ITAYGSLDTAITALKAGAFDFLTKPVDLKRLRDLVTSALRLREPVTSAANNAPADPILGSSPPILKLRKQIAKLARSQAP
LYISGESGSGKELVARRIHALGPRAAQPFIPVNCGAIPSELMESEFFGHRKGSFSGAVADKPGLFQAAKGGTLFLDEVAD
LPIAMQVKLLRAIQEKAVRPVGTQQEEPVDVRLLCATHKDLAAEVAEGRFRQDLFYRINVIELSVPPLRERRDDIPQLAE
HVLVGLAKRADMPIPRLTAECKEMLCNYRFPGNVRELENILERAFTLCEDDIIDVGDIHLSGIPNTPSDQQPALNQIDSL
EDFLDDIERQAIMQALEETRWNKTAAAKRLGLTFRSLRYRLKKLGLED
MNNPLVLIIDDEPDILELLDMTLKRMEVRTRSATTLTQALDLLAEHSFDLCLTDMRLPDGDGMSVVRYIQQHAPDTPVAM
ITAYGSLDTAITALKAGAFDFLTKPVDLKRLRDLVTSALRLREPVTSAANNAPADPILGSSPPILKLRKQIAKLARSQAP
LYISGESGSGKELVARRIHALGPRAAQPFIPVNCGAIPSELMESEFFGHRKGSFSGAVADKPGLFQAAKGGTLFLDEVAD
LPIAMQVKLLRAIQEKAVRPVGTQQEEPVDVRLLCATHKDLAAEVAEGRFRQDLFYRINVIELSVPPLRERRDDIPQLAE
HVLVGLAKRADMPIPRLTAECKEMLCNYRFPGNVRELENILERAFTLCEDDIIDVGDIHLSGIPNTPSDQQPALNQIDSL
EDFLDDIERQAIMQALEETRWNKTAAAKRLGLTFRSLRYRLKKLGLED
Nucleotide
Download Length: 1347 bp
>NTDB_id=421984 G3M63_RS19305 WP_150299557.1 4202480..4203826(+) (pilR) [Pseudomonas sp. OIL-1]
ATGAACAATCCGTTGGTACTGATCATTGACGATGAGCCGGATATCCTCGAACTGCTCGACATGACGCTCAAGCGGATGGA
GGTGCGTACCCGGAGCGCGACCACCCTCACCCAGGCGCTTGACCTGCTGGCCGAGCACAGCTTCGATCTCTGTTTGACGG
ATATGCGTCTGCCGGATGGCGATGGCATGTCTGTGGTGCGTTACATTCAGCAGCACGCGCCCGATACGCCCGTCGCCATG
ATCACTGCCTACGGCAGCCTGGACACTGCTATCACAGCACTGAAAGCCGGTGCCTTCGATTTCCTGACCAAACCGGTTGA
CCTCAAGCGCCTACGGGATCTGGTTACCAGCGCCCTGCGCCTGCGCGAACCCGTGACAAGCGCAGCAAATAACGCACCCG
CCGATCCTATACTCGGTTCATCGCCACCCATTCTGAAGCTGCGCAAGCAGATCGCCAAACTGGCACGCAGTCAGGCGCCG
CTGTATATCAGCGGTGAGTCAGGCAGCGGCAAGGAATTGGTCGCACGTCGCATTCATGCGCTGGGGCCACGCGCTGCACA
ACCCTTTATTCCTGTGAACTGCGGCGCCATCCCATCCGAGTTGATGGAGAGCGAATTCTTCGGCCATCGCAAAGGCAGCT
TCAGTGGCGCCGTCGCCGACAAGCCAGGCCTTTTCCAGGCGGCCAAAGGCGGCACGCTGTTTCTTGACGAAGTCGCCGAC
CTGCCAATCGCCATGCAAGTCAAACTGCTGCGTGCGATTCAGGAAAAAGCCGTACGGCCGGTGGGGACCCAGCAGGAAGA
GCCGGTAGACGTGCGCCTGCTCTGCGCAACGCACAAGGATCTGGCAGCGGAGGTGGCCGAGGGGCGATTCCGCCAGGATC
TGTTTTATCGCATCAATGTAATCGAGCTCAGCGTGCCCCCGCTACGCGAACGACGTGACGACATTCCCCAGCTTGCCGAA
CACGTCCTCGTCGGGCTGGCGAAACGAGCCGATATGCCAATCCCGAGACTGACTGCAGAGTGCAAGGAAATGCTCTGCAA
TTATCGCTTCCCCGGGAACGTCCGCGAGCTGGAGAACATTCTCGAGCGCGCCTTCACGTTATGTGAGGACGACATCATCG
ATGTGGGCGATATTCATTTGTCCGGGATCCCGAATACCCCATCAGACCAACAGCCGGCACTGAACCAGATCGATTCGCTT
GAAGACTTCCTCGATGACATCGAGCGCCAGGCCATCATGCAGGCGCTCGAGGAAACACGCTGGAACAAGACCGCTGCGGC
AAAACGCCTTGGACTGACCTTCCGTTCACTGCGCTACCGCCTGAAAAAGCTTGGCCTTGAGGATTGA
ATGAACAATCCGTTGGTACTGATCATTGACGATGAGCCGGATATCCTCGAACTGCTCGACATGACGCTCAAGCGGATGGA
GGTGCGTACCCGGAGCGCGACCACCCTCACCCAGGCGCTTGACCTGCTGGCCGAGCACAGCTTCGATCTCTGTTTGACGG
ATATGCGTCTGCCGGATGGCGATGGCATGTCTGTGGTGCGTTACATTCAGCAGCACGCGCCCGATACGCCCGTCGCCATG
ATCACTGCCTACGGCAGCCTGGACACTGCTATCACAGCACTGAAAGCCGGTGCCTTCGATTTCCTGACCAAACCGGTTGA
CCTCAAGCGCCTACGGGATCTGGTTACCAGCGCCCTGCGCCTGCGCGAACCCGTGACAAGCGCAGCAAATAACGCACCCG
CCGATCCTATACTCGGTTCATCGCCACCCATTCTGAAGCTGCGCAAGCAGATCGCCAAACTGGCACGCAGTCAGGCGCCG
CTGTATATCAGCGGTGAGTCAGGCAGCGGCAAGGAATTGGTCGCACGTCGCATTCATGCGCTGGGGCCACGCGCTGCACA
ACCCTTTATTCCTGTGAACTGCGGCGCCATCCCATCCGAGTTGATGGAGAGCGAATTCTTCGGCCATCGCAAAGGCAGCT
TCAGTGGCGCCGTCGCCGACAAGCCAGGCCTTTTCCAGGCGGCCAAAGGCGGCACGCTGTTTCTTGACGAAGTCGCCGAC
CTGCCAATCGCCATGCAAGTCAAACTGCTGCGTGCGATTCAGGAAAAAGCCGTACGGCCGGTGGGGACCCAGCAGGAAGA
GCCGGTAGACGTGCGCCTGCTCTGCGCAACGCACAAGGATCTGGCAGCGGAGGTGGCCGAGGGGCGATTCCGCCAGGATC
TGTTTTATCGCATCAATGTAATCGAGCTCAGCGTGCCCCCGCTACGCGAACGACGTGACGACATTCCCCAGCTTGCCGAA
CACGTCCTCGTCGGGCTGGCGAAACGAGCCGATATGCCAATCCCGAGACTGACTGCAGAGTGCAAGGAAATGCTCTGCAA
TTATCGCTTCCCCGGGAACGTCCGCGAGCTGGAGAACATTCTCGAGCGCGCCTTCACGTTATGTGAGGACGACATCATCG
ATGTGGGCGATATTCATTTGTCCGGGATCCCGAATACCCCATCAGACCAACAGCCGGCACTGAACCAGATCGATTCGCTT
GAAGACTTCCTCGATGACATCGAGCGCCAGGCCATCATGCAGGCGCTCGAGGAAACACGCTGGAACAAGACCGCTGCGGC
AAAACGCCTTGGACTGACCTTCCGTTCACTGCGCTACCGCCTGAAAAAGCTTGGCCTTGAGGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
71.205 |
100 |
0.712 |
| pilR | Acinetobacter baumannii strain A118 |
49.024 |
100 |
0.504 |
| luxO | Vibrio cholerae strain A1552 |
38.17 |
100 |
0.382 |