Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SPPN_RS11315 Genome accession   NC_015875
Coordinates   2189761..2190519 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pseudopneumoniae IS7493     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2184761..2195519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPPN_RS11285 (SPPN_11365) comE 2185361..2186113 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  SPPN_RS11290 (SPPN_11370) comD/comD2 2186110..2187435 (-) 1326 WP_001048117.1 competence system sensor histidine kinase ComD Regulator
  SPPN_RS11295 (SPPN_11375) comC/comC1 2187456..2187581 (-) 126 WP_000799687.1 competence-stimulating peptide ComC Regulator
  SPPN_RS11305 (SPPN_11380) rlmH 2187860..2188339 (-) 480 WP_000695932.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SPPN_RS11310 (SPPN_11385) htrA 2188522..2189703 (+) 1182 WP_000681604.1 S1C family serine protease Regulator
  SPPN_RS11315 (SPPN_11390) spo0J 2189761..2190519 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=42050 SPPN_RS11315 WP_000410378.1 2189761..2190519(+) (spo0J) [Streptococcus pseudopneumoniae IS7493]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=42050 SPPN_RS11315 WP_000410378.1 2189761..2190519(+) (spo0J) [Streptococcus pseudopneumoniae IS7493]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTTCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAAATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACGAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment