Detailed information NTG0041994

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SPPN_RS04890
• Genome accession: NC_015875
• Coordinates: 935753..936706 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495917.1
• Uniprot ID: -
• Organism: Streptococcus pseudopneumoniae IS7493
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 930753..941706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPPN_RS12790	-	931196..931300 (+)	105	Protein_984	IS5/IS1182 family transposase	-
SPPN_RS04865 (SPPN_04915)	rpmG	931337..931486 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
SPPN_RS04870 (SPPN_04920)	secG	931526..931759 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SPPN_RS04875 (SPPN_04925)	rnr	932021..934375 (+)	2355	WP_000654904.1	ribonuclease R	-
SPPN_RS04880 (SPPN_04930)	smpB	934338..934805 (+)	468	WP_001051744.1	SsrA-binding protein SmpB	-
SPPN_RS04885 (SPPN_04935)	tehB	934916..935641 (+)	726	WP_044012118.1	SAM-dependent methyltransferase TehB	-
SPPN_RS04890 (SPPN_04940)	coiA	935753..936706 (+)	954	WP_000495917.1	competence protein CoiA	Machinery gene
SPPN_RS04895 (SPPN_04945)	pepF	936725..938527 (+)	1803	WP_000244148.1	oligoendopeptidase F	Regulator
SPPN_RS04900 (SPPN_04950)	-	938529..939242 (+)	714	WP_007285038.1	O-methyltransferase	-
SPPN_RS04905 (SPPN_04955)	prsA	939309..940247 (+)	939	WP_000727951.1	peptidylprolyl isomerase PrsA	-
SPPN_RS12795	-	940554..940649 (+)	96	Protein_994	IS630 family transposase	-
SPPN_RS13905	-	940661..940819 (+)	159	WP_237701464.1	hypothetical protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 37934.50 Da
• Isoelectric Point: 8.4090

>NTDB_id=41994 SPPN_RS04890 WP_000495917.1 935753..936706(+) (coiA) [Streptococcus pseudopneumoniae IS7493]
MFVARDARGKLVNVLEDKLEKQAYTCPACRGQLRLRQGPSVRTHFAHKSLKDCDYSSENESSEHLANKESLYHWLKKDSE
VQLEYLLPELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGEKLWLKERLTRLQQGFLYFSQNMGF
YVWEVDKGKQILRLKYLIHQDLRGKLHYQIKEFPCGQGSLLEILRFPYKKQKISHFTVSEDKDICCYIRQQLYYQNPIWM
KEQAEAYQKGENVLTYGLKEWYPQIRPLVGDFCQIEKDLTSYYQYFQIYYQENPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=41994 SPPN_RS04890 WP_000495917.1 935753..936706(+) (coiA) [Streptococcus pseudopneumoniae IS7493]
ATGTTTGTTGCGAGAGATGCTAGGGGAAAATTGGTAAATGTGTTAGAGGATAAGCTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTAGAGGTCAGCTTCGTTTGCGTCAAGGACCAAGTGTACGGACCCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTATTCCTCTGAAAATGAAAGTTCAGAACATCTGGCCAATAAGGAATCACTTTATCACTGGTTGAAAAAAGATTCAGAG
GTTCAATTAGAATACCTGCTTCCAGAACTTAAACAGATTGCGGATGTGTTTGTAAATGGCAATCTAGCTTTAGAGGTTCA
ATGTAGTCCCTTGCCACAAAAAGTTCTTAAAGAGCGCAGTGAGGGTTATCGTAGCCAGGGTTACCAAGTACTGTGGCTAC
TGGGAGAAAAACTTTGGCTCAAGGAGCGTTTGACTCGTCTGCAACAAGGTTTTCTCTATTTTAGTCAAAACATGGGCTTT
TATGTTTGGGAAGTAGACAAGGGAAAGCAGATTTTAAGGCTTAAATATCTCATACACCAGGATCTTCGAGGTAAACTCCA
TTATCAAATCAAGGAATTTCCCTGTGGTCAAGGTAGTCTACTGGAGATATTACGTTTTCCCTATAAGAAACAAAAAATAT
CTCATTTTACAGTTTCTGAGGATAAGGACATCTGTTGTTATATCCGGCAACAACTGTACTATCAAAATCCCATTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATGTCCTGACTTATGGGCTGAAAGAATGGTATCCACAAATTCGACC
ACTAGTAGGTGATTTTTGCCAAATTGAGAAGGATTTGACCAGCTATTATCAGTATTTTCAAATCTATTACCAAGAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	90.852	100	0.909
coiA	Streptococcus pneumoniae Rx1	90.221	100	0.902
coiA	Streptococcus pneumoniae D39	90.221	100	0.902
coiA	Streptococcus pneumoniae R6	90.221	100	0.902
coiA	Streptococcus pneumoniae TIGR4	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	43.789	100	0.445