Detailed information NTG0419320

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: IBB93_RS09385
• Genome accession: NZ_CP061022
• Coordinates: 1802712..1803980 (-)
• Length: 422 a.a.
• NCBI ID: WP_138496457.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 24738
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1797712..1808980

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB93_RS09355 (IBB93_09410)	-	1797973..1798800 (+)	828	WP_232085691.1	radical SAM protein	-
IBB93_RS09360 (IBB93_09415)	-	1798793..1800334 (+)	1542	WP_207560019.1	ABC transporter ATP-binding protein	-
IBB93_RS09365 (IBB93_09420)	-	1800738..1801250 (-)	513	WP_014608793.1	helix-turn-helix transcriptional regulator	-
IBB93_RS09370 (IBB93_09425)	-	1801566..1802270 (+)	705	Protein_1798	site-specific integrase	-
IBB93_RS09385 (IBB93_09440)	rarA	1802712..1803980 (-)	1269	WP_138496457.1	replication-associated recombination protein A	Machinery gene
IBB93_RS09390 (IBB93_09445)	rpmB	1804150..1804338 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
IBB93_RS09395 (IBB93_09450)	-	1804465..1804731 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
IBB93_RS09400 (IBB93_09455)	ruvX	1804731..1805150 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
IBB93_RS09405 (IBB93_09460)	-	1805259..1805564 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
IBB93_RS09410 (IBB93_09465)	-	1805777..1807423 (+)	1647	WP_138496459.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46448.01 Da
• Isoelectric Point: 7.0888

>NTDB_id=419320 IBB93_RS09385 WP_138496457.1 1802712..1803980(-) (rarA) [Streptococcus thermophilus strain 24738]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVEKSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=419320 IBB93_RS09385 WP_138496457.1 1802712..1803980(-) (rarA) [Streptococcus thermophilus strain 24738]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAAAAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59