Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | H9W85_RS03790 | Genome accession | NZ_CP060703 |
| Coordinates | 777394..777891 (+) | Length | 165 a.a. |
| NCBI ID | WP_003114685.1 | Uniprot ID | A0A0H2ZGD4 |
| Organism | Pseudomonas aeruginosa strain NRD619 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 772394..782891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9W85_RS03775 (H9W85_03775) | bfr | 772402..772866 (+) | 465 | WP_003093668.1 | bacterioferritin | - |
| H9W85_RS03780 (H9W85_03780) | uvrA | 772938..775775 (-) | 2838 | WP_003093663.1 | excinuclease ABC subunit UvrA | Machinery gene |
| H9W85_RS03785 (H9W85_03785) | - | 775989..777377 (+) | 1389 | WP_003103910.1 | MFS transporter | - |
| H9W85_RS03790 (H9W85_03790) | ssb | 777394..777891 (+) | 498 | WP_003114685.1 | single-stranded DNA-binding protein | Machinery gene |
| H9W85_RS03795 (H9W85_03795) | pchA | 777980..779410 (-) | 1431 | WP_003114686.1 | isochorismate synthase PchA | - |
| H9W85_RS03800 (H9W85_03800) | pchB | 779407..779712 (-) | 306 | WP_003106950.1 | isochorismate lyase PchB | - |
| H9W85_RS03805 (H9W85_03805) | pchC | 779712..780467 (-) | 756 | WP_119565446.1 | pyochelin biosynthesis editing thioesterase PchC | - |
| H9W85_RS03810 (H9W85_03810) | pchD | 780464..782107 (-) | 1644 | WP_119565447.1 | pyochelin biosynthesis salicyl-AMP ligase PchD | - |
Sequence
Protein
Download Length: 165 a.a. Molecular weight: 18557.46 Da Isoelectric Point: 5.2781
>NTDB_id=416611 H9W85_RS03790 WP_003114685.1 777394..777891(+) (ssb) [Pseudomonas aeruginosa strain NRD619]
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD
DDIPF
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVE
GSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFD
DDIPF
Nucleotide
Download Length: 498 bp
>NTDB_id=416611 H9W85_RS03790 WP_003114685.1 777394..777891(+) (ssb) [Pseudomonas aeruginosa strain NRD619]
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAACGGCAA
TGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAGCGCACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGATCGCTACACCACCGAGATCGTGGTCGACATCAACGG
CAACATGCAGTTGCTCGGCGGCCGCCCCTCCGGCGACGATTCGCAGCGCGCCCCGCGCGAGCCCATGCAGCGCCCGCAGC
AGGCCCCGCAGCAGCAGTCGCGTCCGGCCCCGCAGCAGCAACCGGCGCCGCAACCGGCCCAGGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAACGGCAA
TGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAGCGCACCGAAT
GGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAA
GGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGATCGCTACACCACCGAGATCGTGGTCGACATCAACGG
CAACATGCAGTTGCTCGGCGGCCGCCCCTCCGGCGACGATTCGCAGCGCGCCCCGCGCGAGCCCATGCAGCGCCCGCAGC
AGGCCCCGCAGCAGCAGTCGCGTCCGGCCCCGCAGCAGCAACCGGCGCCGCAACCGGCCCAGGACTACGACAGCTTCGAC
GACGACATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
58.659 |
100 |
0.636 |
| ssb | Glaesserella parasuis strain SC1401 |
52.486 |
100 |
0.576 |
| ssb | Neisseria gonorrhoeae MS11 |
48.045 |
100 |
0.521 |
| ssb | Neisseria meningitidis MC58 |
47.486 |
100 |
0.515 |