Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | GQ601_RS12925 | Genome accession | NZ_CP047646 |
| Coordinates | 2673965..2674276 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 19/Msa0875 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2668965..2679276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQ601_RS12895 (GQ601_12955) | - | 2669784..2669987 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| GQ601_RS12900 (GQ601_12960) | - | 2669984..2670970 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| GQ601_RS12905 (GQ601_12965) | - | 2670970..2671299 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| GQ601_RS12910 (GQ601_12970) | - | 2671296..2671919 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| GQ601_RS12915 (GQ601_12975) | comGA | 2671971..2672909 (+) | 939 | WP_212593115.1 | GspE/PulE family protein | Machinery gene |
| GQ601_RS12920 (GQ601_12980) | comGB | 2672881..2673951 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GQ601_RS12925 (GQ601_12985) | comGC | 2673965..2674276 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GQ601_RS12930 (GQ601_12990) | comGD | 2674254..2674700 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GQ601_RS12935 (GQ601_12995) | comGE | 2674687..2674986 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| GQ601_RS12940 (GQ601_13000) | comGF | 2674904..2675401 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GQ601_RS12945 (GQ601_13005) | - | 2675498..2675644 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| GQ601_RS12950 (GQ601_13010) | - | 2675634..2676158 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| GQ601_RS12955 (GQ601_13015) | gcvT | 2676317..2677408 (+) | 1092 | WP_031811291.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| GQ601_RS12960 (GQ601_13020) | gcvPA | 2677428..2678774 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=414952 GQ601_RS12925 WP_000472256.1 2673965..2674276(+) (comGC) [Staphylococcus aureus strain 19/Msa0875]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=414952 GQ601_RS12925 WP_000472256.1 2673965..2674276(+) (comGC) [Staphylococcus aureus strain 19/Msa0875]
ATGTTTAAATTTCTAAAAAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTATTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTAAAAAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTATTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |